Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HNRNPCL4P0DMR1 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HNRNPCL4P0DMR1 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.31□□□□□ -0.12
HNRNPCL4P0DMR1 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HNRNPCL4P0DMR1 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.31□□□□□ -0.12
HNRNPCL4P0DMR1 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HNRNPCL4P0DMR1 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.31□□□□□ -0.12
HNRNPCL4P0DMR1 REXO1L4P-201ENST00000605109 1937 ntBASIC14.31□□□□□ -0.12
HNRNPCL4P0DMR1 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HNRNPCL4P0DMR1 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.31□□□□□ -0.12
HNRNPCL4P0DMR1 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HNRNPCL4P0DMR1 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HNRNPCL4P0DMR1 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 AL158211.3-201ENST00000607385 239 ntBASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.3□□□□□ -0.12
HNRNPCL4P0DMR1 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 MIR1233-2-201ENST00000408138 82 ntBASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 MIR1233-1-201ENST00000408722 82 ntBASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 AC044860.1-202ENST00000559481 777 ntBASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.29□□□□□ -0.12
HNRNPCL4P0DMR1 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms