Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 AC015910.1-201ENST00000579400 975 ntBASIC13.74□□□□□ -0.21
SPARCP09486 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.74□□□□□ -0.21
SPARCP09486 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.74□□□□□ -0.21
SPARCP09486 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.74□□□□□ -0.21
SPARCP09486 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SPARCP09486 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.74□□□□□ -0.21
SPARCP09486 AL596442.2-201ENST00000610240 980 ntBASIC13.74□□□□□ -0.21
SPARCP09486 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.74□□□□□ -0.21
SPARCP09486 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.74□□□□□ -0.21
SPARCP09486 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SPARCP09486 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SPARCP09486 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SPARCP09486 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SPARCP09486 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SPARCP09486 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SPARCP09486 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.74□□□□□ -0.21
SPARCP09486 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SPARCP09486 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SPARCP09486 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SPARCP09486 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SPARCP09486 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SPARCP09486 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SPARCP09486 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.74□□□□□ -0.21
SPARCP09486 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.74□□□□□ -0.21
SPARCP09486 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.74□□□□□ -0.21
SPARCP09486 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SPARCP09486 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SPARCP09486 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
SPARCP09486 AC007292.2-201ENST00000593524 1812 ntBASIC13.74□□□□□ -0.21
SPARCP09486 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SPARCP09486 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SPARCP09486 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPARCP09486 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPARCP09486 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPARCP09486 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPARCP09486 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPARCP09486 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPARCP09486 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPARCP09486 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPARCP09486 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SPARCP09486 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
SPARCP09486 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SPARCP09486 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SPARCP09486 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPARCP09486 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPARCP09486 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.73□□□□□ -0.21
SPARCP09486 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPARCP09486 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SPARCP09486 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPARCP09486 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
SPARCP09486 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SPARCP09486 RPL37AP1-201ENST00000412502 279 ntBASIC13.73□□□□□ -0.21
SPARCP09486 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SPARCP09486 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.73□□□□□ -0.21
SPARCP09486 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.73□□□□□ -0.21
SPARCP09486 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPARCP09486 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.73□□□□□ -0.21
SPARCP09486 AC069262.1-201ENST00000539058 672 ntBASIC13.73□□□□□ -0.21
SPARCP09486 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SPARCP09486 AC025048.3-201ENST00000590609 569 ntBASIC13.73□□□□□ -0.21
SPARCP09486 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SPARCP09486 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPARCP09486 AC005702.4-201ENST00000618393 416 ntBASIC13.73□□□□□ -0.21
SPARCP09486 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.73□□□□□ -0.21
SPARCP09486 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPARCP09486 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.73□□□□□ -0.21
SPARCP09486 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SPARCP09486 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.73□□□□□ -0.21
SPARCP09486 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SPARCP09486 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPARCP09486 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
SPARCP09486 INTS4P1-203ENST00000641008 3683 ntBASIC13.73□□□□□ -0.21
SPARCP09486 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SPARCP09486 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SPARCP09486 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPARCP09486 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPARCP09486 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.73□□□□□ -0.21
SPARCP09486 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SPARCP09486 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SPARCP09486 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.73□□□□□ -0.21
SPARCP09486 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SPARCP09486 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.72□□□□□ -0.21
SPARCP09486 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.72□□□□□ -0.21
SPARCP09486 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SPARCP09486 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPARCP09486 Z97205.2-201ENST00000564697 1639 ntBASIC13.72□□□□□ -0.21
SPARCP09486 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.72□□□□□ -0.21
SPARCP09486 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SPARCP09486 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPARCP09486 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SPARCP09486 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.72□□□□□ -0.21
SPARCP09486 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SPARCP09486 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPARCP09486 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPARCP09486 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SPARCP09486 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SPARCP09486 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPARCP09486 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPARCP09486 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SPARCP09486 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms