Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCA5O60264 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCA5O60264 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SMARCA5O60264 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SMARCA5O60264 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCA5O60264 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
SMARCA5O60264 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.9■□□□□ 0.62
SMARCA5O60264 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCA5O60264 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCA5O60264 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCA5O60264 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SMARCA5O60264 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
SMARCA5O60264 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.9■□□□□ 0.62
SMARCA5O60264 AL442647.2-201ENST00000429864 857 ntBASIC18.9■□□□□ 0.62
SMARCA5O60264 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.9■□□□□ 0.62
SMARCA5O60264 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.9■□□□□ 0.62
SMARCA5O60264 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SMARCA5O60264 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.9■□□□□ 0.62
SMARCA5O60264 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.9■□□□□ 0.62
SMARCA5O60264 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.9■□□□□ 0.62
SMARCA5O60264 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.9■□□□□ 0.62
SMARCA5O60264 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SMARCA5O60264 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.9■□□□□ 0.62
SMARCA5O60264 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SMARCA5O60264 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.9■□□□□ 0.62
SMARCA5O60264 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.9■□□□□ 0.62
SMARCA5O60264 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SMARCA5O60264 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCA5O60264 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCA5O60264 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCA5O60264 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.9■□□□□ 0.62
SMARCA5O60264 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCA5O60264 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCA5O60264 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCA5O60264 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCA5O60264 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCA5O60264 FGD5P1-202ENST00000614866 2498 ntBASIC18.9■□□□□ 0.62
SMARCA5O60264 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCA5O60264 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SMARCA5O60264 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCA5O60264 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SMARCA5O60264 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
SMARCA5O60264 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SMARCA5O60264 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SMARCA5O60264 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SMARCA5O60264 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.89■□□□□ 0.62
SMARCA5O60264 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SMARCA5O60264 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMARCA5O60264 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SMARCA5O60264 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMARCA5O60264 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMARCA5O60264 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMARCA5O60264 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMARCA5O60264 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMARCA5O60264 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.89■□□□□ 0.61
SMARCA5O60264 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMARCA5O60264 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMARCA5O60264 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.89■□□□□ 0.61
SMARCA5O60264 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMARCA5O60264 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMARCA5O60264 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.89■□□□□ 0.61
SMARCA5O60264 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.89■□□□□ 0.61
SMARCA5O60264 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMARCA5O60264 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.89■□□□□ 0.61
SMARCA5O60264 AC005252.2-201ENST00000624630 1141 ntBASIC18.89■□□□□ 0.61
SMARCA5O60264 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMARCA5O60264 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SMARCA5O60264 NORAD-201ENST00000565493 5339 ntBASIC18.89■□□□□ 0.61
SMARCA5O60264 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.89■□□□□ 0.61
SMARCA5O60264 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMARCA5O60264 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC18.89■□□□□ 0.61
SMARCA5O60264 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMARCA5O60264 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SMARCA5O60264 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.89■□□□□ 0.61
SMARCA5O60264 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMARCA5O60264 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
SMARCA5O60264 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SMARCA5O60264 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCA5O60264 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.88■□□□□ 0.61
SMARCA5O60264 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.88■□□□□ 0.61
SMARCA5O60264 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCA5O60264 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCA5O60264 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.88■□□□□ 0.61
SMARCA5O60264 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCA5O60264 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.88■□□□□ 0.61
SMARCA5O60264 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
SMARCA5O60264 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCA5O60264 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCA5O60264 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCA5O60264 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.88■□□□□ 0.61
SMARCA5O60264 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SMARCA5O60264 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCA5O60264 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SMARCA5O60264 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.88■□□□□ 0.61
SMARCA5O60264 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.88■□□□□ 0.61
SMARCA5O60264 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.88■□□□□ 0.61
SMARCA5O60264 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.88■□□□□ 0.61
SMARCA5O60264 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.88■□□□□ 0.61
SMARCA5O60264 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCA5O60264 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms