Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ERGIC3Q9Y282 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.1□□□□□ -0.15
ERGIC3Q9Y282 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 ACE3P-201ENST00000423435 1973 ntBASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 AC083964.2-201ENST00000623988 2396 ntBASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 AC008735.5-201ENST00000623544 497 ntBASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ERGIC3Q9Y282 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
ERGIC3Q9Y282 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
ERGIC3Q9Y282 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
ERGIC3Q9Y282 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ERGIC3Q9Y282 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.15
ERGIC3Q9Y282 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
ERGIC3Q9Y282 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
ERGIC3Q9Y282 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 CES1P1-201ENST00000421606 1704 ntBASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 PRSS29P-201ENST00000440800 595 ntBASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 AC105339.3-201ENST00000560043 636 ntBASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ERGIC3Q9Y282 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms