Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 CICP23-201ENST00000605013 2741 ntBASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 DUX4L47-201ENST00000566374 394 ntBASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGC3Q9UN70 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.14■□□□□ 0.18
PCDHGC3Q9UN70 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
PCDHGC3Q9UN70 AC023824.1-201ENST00000562945 2975 ntBASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 NFIC-211ENST00000641145 8399 ntBASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 AL137783.1-201ENST00000623494 1896 ntBASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 KLF2P2-201ENST00000416807 1039 ntBASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 AP001063.1-201ENST00000568332 529 ntBASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 CU634019.7-201ENST00000624153 1185 ntBASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 FP236241.2-201ENST00000624906 1185 ntBASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 AL603764.1-201ENST00000636452 321 ntBASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 AL033527.5-201ENST00000641382 801 ntBASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGC3Q9UN70 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms