Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 AL445248.1-201ENST00000366152 624 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 GCA-203ENST00000429691 824 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 MTATP6P23-201ENST00000440153 476 ntBASIC18.55■□□□□ 0.56
RNF216Q9NWF9 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 AC087672.1-201ENST00000479876 766 ntBASIC18.55■□□□□ 0.56
RNF216Q9NWF9 AC067863.1-201ENST00000494933 530 ntBASIC18.55■□□□□ 0.56
RNF216Q9NWF9 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 AC005412.3-201ENST00000580309 715 ntBASIC18.55■□□□□ 0.56
RNF216Q9NWF9 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 AC022145.2-201ENST00000598203 171 ntBASIC18.55■□□□□ 0.56
RNF216Q9NWF9 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 AC106028.4-201ENST00000614509 607 ntBASIC18.55■□□□□ 0.56
RNF216Q9NWF9 AL359314.1-201ENST00000616913 261 ntBASIC18.55■□□□□ 0.56
RNF216Q9NWF9 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF216Q9NWF9 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 FYTTD1-203ENST00000415708 1342 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 BCCIP-201ENST00000278100 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 AC008268.1-201ENST00000425887 1119 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 AL671277.1-201ENST00000429656 993 ntBASIC18.54■□□□□ 0.56
RNF216Q9NWF9 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 AL157884.3-201ENST00000448273 1184 ntBASIC18.54■□□□□ 0.56
RNF216Q9NWF9 CLIC4P1-201ENST00000453177 535 ntBASIC18.54■□□□□ 0.56
RNF216Q9NWF9 SLC25A6P2-201ENST00000497974 877 ntBASIC18.54■□□□□ 0.56
RNF216Q9NWF9 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 SERBP1P6-201ENST00000507707 932 ntBASIC18.54■□□□□ 0.56
RNF216Q9NWF9 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 NSD1-211ENST00000511258 809 ntTSL 3 BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.54■□□□□ 0.56
RNF216Q9NWF9 MIR4515-201ENST00000584082 81 ntBASIC18.54■□□□□ 0.56
RNF216Q9NWF9 AC097376.2-203ENST00000608663 431 ntTSL 3 BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 CBR3-AS1-208ENST00000608690 590 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 AL158062.1-201ENST00000619632 745 ntBASIC18.54■□□□□ 0.56
RNF216Q9NWF9 AC123767.1-202ENST00000620407 817 ntBASIC18.54■□□□□ 0.56
RNF216Q9NWF9 AC010480.1-201ENST00000624823 684 ntBASIC18.54■□□□□ 0.56
RNF216Q9NWF9 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF216Q9NWF9 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms