RNA–Protein interactions for RNA: ENST00000429691.6

GCA-203, Transcript of grancalcin, humanhuman

TSL 3 BASIC

Gene GCA, Length 824 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-203ENST00000429691 AEBP2Q6ZN18 517 aaPredicted RBP29.08■■■□□ 2.25
GCA-203ENST00000429691 CHIC1Q5VXU3 224 aa27.32■■□□□ 1.96
GCA-203ENST00000429691 SENP3Q9H4L4 574 aaPredicted RBP24.65■■□□□ 1.54
GCA-203ENST00000429691 PHF23Q9BUL5 403 aaPredicted RBP24.36■■□□□ 1.49
GCA-203ENST00000429691 FOXD1Q16676 465 aa23.11■■□□□ 1.29
GCA-203ENST00000429691 PLPPR3Q6T4P5 718 aa21.65■■□□□ 1.06
GCA-203ENST00000429691 MSH5O43196 834 aa21.56■■□□□ 1.04
GCA-203ENST00000429691 PPP6R1Q9UPN7 881 aa21.53■■□□□ 1.04
GCA-203ENST00000429691 POTEDQ86YR6 584 aa21.5■■□□□ 1.03
GCA-203ENST00000429691 PIAS4Q8N2W9 510 aaPredicted RBP21.48■■□□□ 1.03
GCA-203ENST00000429691 ADRA2BP18089 450 aa21.39■■□□□ 1.01
GCA-203ENST00000429691 MAPK8IP2Q13387 824 aaPredicted RBP19.73■□□□□ 0.75
GCA-203ENST00000429691 DMRT2Q9Y5R5 561 aa19.58■□□□□ 0.72
GCA-203ENST00000429691 SCAF1Q9H7N4 1312 aaKnown RBP19.36■□□□□ 0.69
GCA-203ENST00000429691 PPP4R3CPQ6ZMV5 832 aa19.02■□□□□ 0.64
GCA-203ENST00000429691 HOXD11P31277 338 aaPredicted RBP18.79■□□□□ 0.6
GCA-203ENST00000429691 DCAF8L1A6NGE4 600 aa18.77■□□□□ 0.6
GCA-203ENST00000429691 CNKSR2Q8WXI2 1034 aa18.65■□□□□ 0.58
GCA-203ENST00000429691 CACNB1Q02641 598 aaPredicted RBP18.62■□□□□ 0.57
GCA-203ENST00000429691 RNF216Q9NWF9 866 aaPredicted RBP18.55■□□□□ 0.56
GCA-203ENST00000429691 RNF39Q9H2S5 420 aa18.47■□□□□ 0.55
GCA-203ENST00000429691 NCBP3Q53F19 620 aaKnown RBP18.11■□□□□ 0.49
GCA-203ENST00000429691 C1QBPQ07021 282 aaKnown RBP18.1■□□□□ 0.49
GCA-203ENST00000429691 DNAJC5BQ9UF47 199 aa18.1■□□□□ 0.49
GCA-203ENST00000429691 NPM3O75607 178 aaKnown RBP18■□□□□ 0.47
GCA-203ENST00000429691 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.83■□□□□ 0.449e-8■■□□□ 14
GCA-203ENST00000429691 U3KPZ7 1027 aaPredicted RBP17.54■□□□□ 0.4
GCA-203ENST00000429691 KCNA4P22459 653 aa17.51■□□□□ 0.39
GCA-203ENST00000429691 SPINK5Q9NQ38 1064 aaPredicted RBP17.35■□□□□ 0.37
GCA-203ENST00000429691 SLC4A2P04920 1241 aa17.3■□□□□ 0.36
GCA-203ENST00000429691 CAPN15O75808 1086 aa17.24■□□□□ 0.35
GCA-203ENST00000429691 DSG3P32926 999 aa17.24■□□□□ 0.35
GCA-203ENST00000429691 TRHP20396 242 aaPredicted RBP16.95■□□□□ 0.3
GCA-203ENST00000429691 ABCB7O75027 752 aa16.87■□□□□ 0.29
GCA-203ENST00000429691 ZNF219Q9P2Y4 722 aaPredicted RBP16.81■□□□□ 0.28
GCA-203ENST00000429691 APLP2Q06481 763 aa16.8■□□□□ 0.28
GCA-203ENST00000429691 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.78■□□□□ 0.28
GCA-203ENST00000429691 HNRNPUL2Q1KMD3 747 aaKnown RBP16.78■□□□□ 0.28
GCA-203ENST00000429691 POTEHQ6S545 545 aa16.76■□□□□ 0.27
GCA-203ENST00000429691 SAMD1Q6SPF0 538 aaPredicted RBP16.71■□□□□ 0.27
GCA-203ENST00000429691 MYCNP04198 464 aaPredicted RBP16.57■□□□□ 0.24
GCA-203ENST00000429691 POLA2Q14181 598 aa16.43■□□□□ 0.22
GCA-203ENST00000429691 SLC4A1APQ9BWU0 796 aaKnown RBP16.42■□□□□ 0.22
GCA-203ENST00000429691 ATF5Q9Y2D1 282 aaPredicted RBP16.37■□□□□ 0.21
GCA-203ENST00000429691 FOXD4L1Q9NU39 408 aa16.32■□□□□ 0.2
GCA-203ENST00000429691 RBM42Q9BTD8 480 aaKnown RBP16.31■□□□□ 0.2
GCA-203ENST00000429691 ZBTB22O15209 634 aa16.18■□□□□ 0.18
GCA-203ENST00000429691 CHRDL2Q6WN34 429 aa16.12■□□□□ 0.17
GCA-203ENST00000429691 OSCARQ8IYS5 282 aa15.96■□□□□ 0.15
GCA-203ENST00000429691 ZBTB12Q9Y330 459 aaPredicted RBP15.96■□□□□ 0.15
GCA-203ENST00000429691 AKT1S1Q96B36 256 aa15.95■□□□□ 0.14
GCA-203ENST00000429691 REM2Q8IYK8 340 aaPredicted RBP15.86■□□□□ 0.13
GCA-203ENST00000429691 ATXN8OSP0DMR3 200 aa15.78■□□□□ 0.12
GCA-203ENST00000429691 PIP4P2Q8N4L2 257 aa15.75■□□□□ 0.11
GCA-203ENST00000429691 PITPNM1O00562 1244 aa15.73■□□□□ 0.11
GCA-203ENST00000429691 FXR2P51116 673 aaKnown RBP eCLIP15.61■□□□□ 0.09
GCA-203ENST00000429691 SP7Q8TDD2 431 aaPredicted RBP15.61■□□□□ 0.09
GCA-203ENST00000429691 MKRN4PQ13434 485 aaPredicted RBP15.59■□□□□ 0.09
GCA-203ENST00000429691 FBLN2P98095 1184 aa15.55■□□□□ 0.08
GCA-203ENST00000429691 SPDYE2BA6NHP3 402 aa15.52■□□□□ 0.08
GCA-203ENST00000429691 SPDYE6P0CI01 402 aa15.52■□□□□ 0.08
GCA-203ENST00000429691 SPDYE2Q495Y8 402 aa15.52■□□□□ 0.08
GCA-203ENST00000429691 HAX1O00165 279 aa15.45■□□□□ 0.06
GCA-203ENST00000429691 EVX2Q03828 476 aa15.4■□□□□ 0.06
GCA-203ENST00000429691 SSUH2Q9Y2M2 353 aa15.38■□□□□ 0.05
GCA-203ENST00000429691 CLEC11AQ9Y240 323 aa15.36■□□□□ 0.05
GCA-203ENST00000429691 ZNF692Q9BU19 519 aaPredicted RBP15.34■□□□□ 0.05
GCA-203ENST00000429691 SPDYE1Q8NFV5 336 aaPredicted RBP15.27■□□□□ 0.04
GCA-203ENST00000429691 PRKAR2AP13861 404 aaKnown RBP15.26■□□□□ 0.03
GCA-203ENST00000429691 CSRNP3Q8WYN3 585 aa15.19■□□□□ 0.02
GCA-203ENST00000429691 C19orf67A6NJJ6 358 aa15.12■□□□□ 0.01
GCA-203ENST00000429691 CHADLQ6NUI6 762 aa15.11■□□□□ 0.01
GCA-203ENST00000429691 PABPN1Q86U42 306 aaKnown RBP eCLIP15.11■□□□□ 0.01
GCA-203ENST00000429691 PRR29P0C7W0 189 aa15.02■□□□□ -0
GCA-203ENST00000429691 EHMT2Q96KQ7 1210 aa14.94□□□□□ -0.02
GCA-203ENST00000429691 GABBR2O75899 941 aa14.93□□□□□ -0.02
GCA-203ENST00000429691 FARP1Q9Y4F1 1045 aaPredicted RBP14.81□□□□□ -0.04
GCA-203ENST00000429691 CD44P16070 742 aaKnown RBP14.76□□□□□ -0.05
GCA-203ENST00000429691 POTEIP0CG38 1075 aa14.71□□□□□ -0.05
GCA-203ENST00000429691 CREBZFQ9NS37 354 aa14.69□□□□□ -0.06
GCA-203ENST00000429691 SPDYE4A6NLX3 237 aa14.64□□□□□ -0.07
GCA-203ENST00000429691 LHX8Q68G74 356 aa14.63□□□□□ -0.07
GCA-203ENST00000429691 STAG3Q9UJ98 1225 aa14.57□□□□□ -0.08
GCA-203ENST00000429691 ZNF579Q8NAF0 562 aaKnown RBP14.55□□□□□ -0.08
GCA-203ENST00000429691 ZRANB1Q9UGI0 708 aa14.53□□□□□ -0.08
GCA-203ENST00000429691 MNX1P50219 401 aaPredicted RBP14.46□□□□□ -0.09
GCA-203ENST00000429691 CLCN6P51797 869 aa14.46□□□□□ -0.09
GCA-203ENST00000429691 GALR2O43603 387 aaPredicted RBP14.44□□□□□ -0.1
GCA-203ENST00000429691 DCBLD2Q96PD2 775 aa14.43□□□□□ -0.1
GCA-203ENST00000429691 PHF12Q96QT6 1004 aa14.37□□□□□ -0.11
GCA-203ENST00000429691 PROM2Q8N271 834 aa14.34□□□□□ -0.11
GCA-203ENST00000429691 PAK3O75914 559 aaPredicted RBP14.31□□□□□ -0.12
GCA-203ENST00000429691 NPM1P06748 294 aaKnown RBP eCLIP14.29□□□□□ -0.12
GCA-203ENST00000429691 POTEB2H3BUK9 544 aa14.24□□□□□ -0.13
GCA-203ENST00000429691 PELP1Q8IZL8 1130 aaKnown RBP14.21□□□□□ -0.13
GCA-203ENST00000429691 OTUD5Q96G74 571 aa14.16□□□□□ -0.14
GCA-203ENST00000429691 MS4A3Q96HJ5 214 aa14.16□□□□□ -0.14
GCA-203ENST00000429691 TSPYL2Q9H2G4 693 aaPredicted RBP14.13□□□□□ -0.15
GCA-203ENST00000429691 ASTLQ6HA08 431 aaPredicted RBP14.08□□□□□ -0.16
GCA-203ENST00000429691 CCDC61Q9Y6R9 512 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms