RNA–Protein interactions for RNA: ENST00000453177.2

CLIC4P1-201, Transcript of chloride intracellular channel 4 pseudogene 1, humanhuman

BASIC

Gene CLIC4P1, Length 535 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4P1-201ENST00000453177 AEBP2Q6ZN18 517 aaPredicted RBP27.76■■■□□ 2.03
CLIC4P1-201ENST00000453177 CHIC1Q5VXU3 224 aa27.18■■□□□ 1.94
CLIC4P1-201ENST00000453177 PHF23Q9BUL5 403 aaPredicted RBP23.9■■□□□ 1.42
CLIC4P1-201ENST00000453177 SENP3Q9H4L4 574 aaPredicted RBP23.56■■□□□ 1.36
CLIC4P1-201ENST00000453177 PLPPR3Q6T4P5 718 aa22.1■■□□□ 1.13
CLIC4P1-201ENST00000453177 FOXD1Q16676 465 aa21.85■■□□□ 1.09
CLIC4P1-201ENST00000453177 ADRA2BP18089 450 aa21.07■□□□□ 0.96
CLIC4P1-201ENST00000453177 PPP6R1Q9UPN7 881 aa21.07■□□□□ 0.96
CLIC4P1-201ENST00000453177 PIAS4Q8N2W9 510 aaPredicted RBP20.64■□□□□ 0.89
CLIC4P1-201ENST00000453177 MSH5O43196 834 aa20.13■□□□□ 0.81
CLIC4P1-201ENST00000453177 PPP4R3CPQ6ZMV5 832 aa19.49■□□□□ 0.71
CLIC4P1-201ENST00000453177 SCAF1Q9H7N4 1312 aaKnown RBP19.27■□□□□ 0.68
CLIC4P1-201ENST00000453177 KCNA4P22459 653 aa19.12■□□□□ 0.65
CLIC4P1-201ENST00000453177 MAPK8IP2Q13387 824 aaPredicted RBP19.09■□□□□ 0.65
CLIC4P1-201ENST00000453177 NCBP3Q53F19 620 aaKnown RBP19.01■□□□□ 0.63
CLIC4P1-201ENST00000453177 CNKSR2Q8WXI2 1034 aa18.93■□□□□ 0.62
CLIC4P1-201ENST00000453177 DMRT2Q9Y5R5 561 aa18.81■□□□□ 0.6
CLIC4P1-201ENST00000453177 NPM3O75607 178 aaKnown RBP18.72■□□□□ 0.59
CLIC4P1-201ENST00000453177 RNF216Q9NWF9 866 aaPredicted RBP18.54■□□□□ 0.56
CLIC4P1-201ENST00000453177 HOXD11P31277 338 aaPredicted RBP18.44■□□□□ 0.54
CLIC4P1-201ENST00000453177 SLC4A1APQ9BWU0 796 aaKnown RBP18.22■□□□□ 0.51
CLIC4P1-201ENST00000453177 POTEDQ86YR6 584 aa18.21■□□□□ 0.51
CLIC4P1-201ENST00000453177 DNAJC5BQ9UF47 199 aa18.14■□□□□ 0.49
CLIC4P1-201ENST00000453177 DCAF8L1A6NGE4 600 aa18.02■□□□□ 0.48
CLIC4P1-201ENST00000453177 EHMT2Q96KQ7 1210 aa17.79■□□□□ 0.44
CLIC4P1-201ENST00000453177 SLC4A2P04920 1241 aa17.65■□□□□ 0.42
CLIC4P1-201ENST00000453177 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.6■□□□□ 0.41
CLIC4P1-201ENST00000453177 ZBTB22O15209 634 aa17.58■□□□□ 0.4
CLIC4P1-201ENST00000453177 FOXD4L1Q9NU39 408 aa17.58■□□□□ 0.4
CLIC4P1-201ENST00000453177 CSRNP3Q8WYN3 585 aa17.53■□□□□ 0.4
CLIC4P1-201ENST00000453177 MYCNP04198 464 aaPredicted RBP17.31■□□□□ 0.36
CLIC4P1-201ENST00000453177 U3KPZ7 1027 aaPredicted RBP17.31■□□□□ 0.36
CLIC4P1-201ENST00000453177 RNF39Q9H2S5 420 aa17.25■□□□□ 0.35
CLIC4P1-201ENST00000453177 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.12■□□□□ 0.33
CLIC4P1-201ENST00000453177 HNRNPUL2Q1KMD3 747 aaKnown RBP17.12■□□□□ 0.33
CLIC4P1-201ENST00000453177 SAMD1Q6SPF0 538 aaPredicted RBP17.07■□□□□ 0.32
CLIC4P1-201ENST00000453177 C1QBPQ07021 282 aaKnown RBP17.05■□□□□ 0.32
CLIC4P1-201ENST00000453177 ATXN8OSP0DMR3 200 aa16.95■□□□□ 0.3
CLIC4P1-201ENST00000453177 APLP2Q06481 763 aa16.93■□□□□ 0.3
CLIC4P1-201ENST00000453177 ATF5Q9Y2D1 282 aaPredicted RBP16.82■□□□□ 0.28
CLIC4P1-201ENST00000453177 SPINK5Q9NQ38 1064 aaPredicted RBP16.81■□□□□ 0.28
CLIC4P1-201ENST00000453177 CACNB1Q02641 598 aaPredicted RBP16.77■□□□□ 0.28
CLIC4P1-201ENST00000453177 CAPN15O75808 1086 aa16.75■□□□□ 0.27
CLIC4P1-201ENST00000453177 TRHP20396 242 aaPredicted RBP16.69■□□□□ 0.26
CLIC4P1-201ENST00000453177 ZNF219Q9P2Y4 722 aaPredicted RBP16.68■□□□□ 0.26
CLIC4P1-201ENST00000453177 ABCB7O75027 752 aa16.44■□□□□ 0.22
CLIC4P1-201ENST00000453177 DSG3P32926 999 aa16.44■□□□□ 0.22
CLIC4P1-201ENST00000453177 POLA2Q14181 598 aa16.42■□□□□ 0.22
CLIC4P1-201ENST00000453177 ZBTB12Q9Y330 459 aaPredicted RBP16.17■□□□□ 0.18
CLIC4P1-201ENST00000453177 FBLN2P98095 1184 aa16.14■□□□□ 0.17
CLIC4P1-201ENST00000453177 MKRN4PQ13434 485 aaPredicted RBP16.1■□□□□ 0.17
CLIC4P1-201ENST00000453177 OSCARQ8IYS5 282 aa15.87■□□□□ 0.13
CLIC4P1-201ENST00000453177 FKBP8Q14318 412 aa15.86■□□□□ 0.13
CLIC4P1-201ENST00000453177 SPDYE4A6NLX3 237 aa15.78■□□□□ 0.12
CLIC4P1-201ENST00000453177 SPDYE2BA6NHP3 402 aa15.73■□□□□ 0.11
CLIC4P1-201ENST00000453177 SPDYE6P0CI01 402 aa15.73■□□□□ 0.11
CLIC4P1-201ENST00000453177 SPDYE2Q495Y8 402 aa15.73■□□□□ 0.11
CLIC4P1-201ENST00000453177 RBM42Q9BTD8 480 aaKnown RBP15.68■□□□□ 0.1
CLIC4P1-201ENST00000453177 ZNF692Q9BU19 519 aaPredicted RBP15.68■□□□□ 0.1
CLIC4P1-201ENST00000453177 SSUH2Q9Y2M2 353 aa15.61■□□□□ 0.09
CLIC4P1-201ENST00000453177 PROM2Q8N271 834 aa15.51■□□□□ 0.07
CLIC4P1-201ENST00000453177 AKT1S1Q96B36 256 aa15.49■□□□□ 0.07
CLIC4P1-201ENST00000453177 PABPN1Q86U42 306 aaKnown RBP eCLIP15.48■□□□□ 0.07
CLIC4P1-201ENST00000453177 REM2Q8IYK8 340 aaPredicted RBP15.35■□□□□ 0.05
CLIC4P1-201ENST00000453177 FBXO3Q9UK99 471 aa15.28■□□□□ 0.04
CLIC4P1-201ENST00000453177 SPDYE1Q8NFV5 336 aaPredicted RBP15.26■□□□□ 0.03
CLIC4P1-201ENST00000453177 STAG3Q9UJ98 1225 aa15.23■□□□□ 0.03
CLIC4P1-201ENST00000453177 CLEC11AQ9Y240 323 aa15.19■□□□□ 0.02
CLIC4P1-201ENST00000453177 PITPNM1O00562 1244 aa15.17■□□□□ 0.02
CLIC4P1-201ENST00000453177 VASPP50552 380 aaPredicted RBP15.07■□□□□ 0
CLIC4P1-201ENST00000453177 PRR29P0C7W0 189 aa15.06■□□□□ 0
CLIC4P1-201ENST00000453177 CHRDL2Q6WN34 429 aa15□□□□□ -0.01
CLIC4P1-201ENST00000453177 MIER1Q8N108 512 aa14.96□□□□□ -0.01
CLIC4P1-201ENST00000453177 PLCD3Q8N3E9 789 aa14.96□□□□□ -0.01
CLIC4P1-201ENST00000453177 PLEKHG5O94827 1062 aa14.9□□□□□ -0.02
CLIC4P1-201ENST00000453177 CREBZFQ9NS37 354 aa14.87□□□□□ -0.03
CLIC4P1-201ENST00000453177 FXR2P51116 673 aaKnown RBP eCLIP14.86□□□□□ -0.03
CLIC4P1-201ENST00000453177 IFNLR1Q8IU57 520 aaPredicted RBP14.86□□□□□ -0.03
CLIC4P1-201ENST00000453177 PIP4P2Q8N4L2 257 aa14.82□□□□□ -0.04
CLIC4P1-201ENST00000453177 KLHL34Q8N239 644 aa14.81□□□□□ -0.04
CLIC4P1-201ENST00000453177 CHADLQ6NUI6 762 aa14.8□□□□□ -0.04
CLIC4P1-201ENST00000453177 PRKAR2AP13861 404 aaKnown RBP14.79□□□□□ -0.04
CLIC4P1-201ENST00000453177 ZBTB47Q9UFB7 747 aaPredicted RBP14.78□□□□□ -0.04
CLIC4P1-201ENST00000453177 MNX1P50219 401 aaPredicted RBP14.71□□□□□ -0.05
CLIC4P1-201ENST00000453177 SPOCK2Q92563 424 aa14.69□□□□□ -0.06
CLIC4P1-201ENST00000453177 FARP1Q9Y4F1 1045 aaPredicted RBP14.67□□□□□ -0.06
CLIC4P1-201ENST00000453177 NPM1P06748 294 aaKnown RBP eCLIP14.64□□□□□ -0.07
CLIC4P1-201ENST00000453177 AMER1Q5JTC6 1135 aaPredicted RBP14.57□□□□□ -0.08
CLIC4P1-201ENST00000453177 NUBP1P53384 320 aa14.56□□□□□ -0.08
CLIC4P1-201ENST00000453177 RTN4Q9NQC3 1192 aaKnown RBP14.52□□□□□ -0.09
CLIC4P1-201ENST00000453177 RASEFQ8IZ41 740 aa14.49□□□□□ -0.09
CLIC4P1-201ENST00000453177 FAM212AQ96EL1 285 aa14.46□□□□□ -0.09
CLIC4P1-201ENST00000453177 CIZ1Q9ULV3 898 aaPredicted RBP14.46□□□□□ -0.09
CLIC4P1-201ENST00000453177 DCAF8Q5TAQ9 597 aa14.44□□□□□ -0.1
CLIC4P1-201ENST00000453177 POTEHQ6S545 545 aa14.44□□□□□ -0.1
CLIC4P1-201ENST00000453177 GSE1Q14687 1217 aa14.43□□□□□ -0.1
CLIC4P1-201ENST00000453177 TSPYL2Q9H2G4 693 aaPredicted RBP14.41□□□□□ -0.1
CLIC4P1-201ENST00000453177 PAK3O75914 559 aaPredicted RBP14.38□□□□□ -0.11
CLIC4P1-201ENST00000453177 PKD2Q13563 968 aa14.38□□□□□ -0.11
CLIC4P1-201ENST00000453177 CD44P16070 742 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms