RNA–Protein interactions for RNA: ENST00000481498.1

GKN2-202, Transcript of gastrokine 2, humanhuman

TSL 2 BASIC

Gene GKN2, Length 1,498 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GKN2-202ENST00000481498 AEBP2Q6ZN18 517 aaPredicted RBP28.38■■■□□ 2.13
GKN2-202ENST00000481498 CHIC1Q5VXU3 224 aa27.26■■□□□ 1.95
GKN2-202ENST00000481498 SENP3Q9H4L4 574 aaPredicted RBP24.12■■□□□ 1.45
GKN2-202ENST00000481498 PHF23Q9BUL5 403 aaPredicted RBP23.95■■□□□ 1.42
GKN2-202ENST00000481498 FOXD1Q16676 465 aa22.45■■□□□ 1.18
GKN2-202ENST00000481498 PLPPR3Q6T4P5 718 aa21.93■■□□□ 1.1
GKN2-202ENST00000481498 PPP6R1Q9UPN7 881 aa21.27■■□□□ 1
GKN2-202ENST00000481498 ADRA2BP18089 450 aa21.22■□□□□ 0.99
GKN2-202ENST00000481498 PIAS4Q8N2W9 510 aaPredicted RBP21.06■□□□□ 0.96
GKN2-202ENST00000481498 MSH5O43196 834 aa20.84■□□□□ 0.93
GKN2-202ENST00000481498 POTEDQ86YR6 584 aa20.69■□□□□ 0.9
GKN2-202ENST00000481498 MAPK8IP2Q13387 824 aaPredicted RBP19.39■□□□□ 0.69
GKN2-202ENST00000481498 SCAF1Q9H7N4 1312 aaKnown RBP19.36■□□□□ 0.69
GKN2-202ENST00000481498 PPP4R3CPQ6ZMV5 832 aa19.28■□□□□ 0.68
GKN2-202ENST00000481498 DMRT2Q9Y5R5 561 aa19.19■□□□□ 0.66
GKN2-202ENST00000481498 CNKSR2Q8WXI2 1034 aa18.82■□□□□ 0.6
GKN2-202ENST00000481498 HOXD11P31277 338 aaPredicted RBP18.62■□□□□ 0.57
GKN2-202ENST00000481498 NCBP3Q53F19 620 aaKnown RBP18.62■□□□□ 0.57
GKN2-202ENST00000481498 RNF216Q9NWF9 866 aaPredicted RBP18.56■□□□□ 0.56
GKN2-202ENST00000481498 NPM3O75607 178 aaKnown RBP18.39■□□□□ 0.54
GKN2-202ENST00000481498 DCAF8L1A6NGE4 600 aa18.36■□□□□ 0.53
GKN2-202ENST00000481498 KCNA4P22459 653 aa18.36■□□□□ 0.53
GKN2-202ENST00000481498 CACNB1Q02641 598 aaPredicted RBP17.91■□□□□ 0.46
GKN2-202ENST00000481498 DNAJC5BQ9UF47 199 aa17.9■□□□□ 0.46
GKN2-202ENST00000481498 RNF39Q9H2S5 420 aa17.84■□□□□ 0.45
GKN2-202ENST00000481498 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.72■□□□□ 0.43
GKN2-202ENST00000481498 C1QBPQ07021 282 aaKnown RBP17.58■□□□□ 0.41
GKN2-202ENST00000481498 SLC4A2P04920 1241 aa17.48■□□□□ 0.39
GKN2-202ENST00000481498 U3KPZ7 1027 aaPredicted RBP17.42■□□□□ 0.38
GKN2-202ENST00000481498 SLC4A1APQ9BWU0 796 aaKnown RBP17.38■□□□□ 0.37
GKN2-202ENST00000481498 SPINK5Q9NQ38 1064 aaPredicted RBP17.07■□□□□ 0.32
GKN2-202ENST00000481498 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17■□□□□ 0.31
GKN2-202ENST00000481498 HNRNPUL2Q1KMD3 747 aaKnown RBP17■□□□□ 0.31
GKN2-202ENST00000481498 FOXD4L1Q9NU39 408 aa17■□□□□ 0.31
GKN2-202ENST00000481498 CAPN15O75808 1086 aa16.99■□□□□ 0.31
GKN2-202ENST00000481498 MYCNP04198 464 aaPredicted RBP16.99■□□□□ 0.31
GKN2-202ENST00000481498 SAMD1Q6SPF0 538 aaPredicted RBP16.93■□□□□ 0.3
GKN2-202ENST00000481498 APLP2Q06481 763 aa16.92■□□□□ 0.3
GKN2-202ENST00000481498 ZBTB22O15209 634 aa16.91■□□□□ 0.3
GKN2-202ENST00000481498 DSG3P32926 999 aa16.83■□□□□ 0.28
GKN2-202ENST00000481498 TRHP20396 242 aaPredicted RBP16.8■□□□□ 0.28
GKN2-202ENST00000481498 ZNF219Q9P2Y4 722 aaPredicted RBP16.78■□□□□ 0.28
GKN2-202ENST00000481498 ABCB7O75027 752 aa16.65■□□□□ 0.26
GKN2-202ENST00000481498 ATF5Q9Y2D1 282 aaPredicted RBP16.6■□□□□ 0.25
GKN2-202ENST00000481498 POLA2Q14181 598 aa16.44■□□□□ 0.22
GKN2-202ENST00000481498 ATXN8OSP0DMR3 200 aa16.43■□□□□ 0.22
GKN2-202ENST00000481498 CSRNP3Q8WYN3 585 aa16.42■□□□□ 0.22
GKN2-202ENST00000481498 EHMT2Q96KQ7 1210 aa16.4■□□□□ 0.22
GKN2-202ENST00000481498 POTEHQ6S545 545 aa16.14■□□□□ 0.17
GKN2-202ENST00000481498 ZBTB12Q9Y330 459 aaPredicted RBP16.12■□□□□ 0.17
GKN2-202ENST00000481498 RBM42Q9BTD8 480 aaKnown RBP16.02■□□□□ 0.15
GKN2-202ENST00000481498 DNAJC5Q9H3Z4 198 aa15.97■□□□□ 0.15
GKN2-202ENST00000481498 OSCARQ8IYS5 282 aa15.93■□□□□ 0.14
GKN2-202ENST00000481498 FBLN2P98095 1184 aa15.87■□□□□ 0.13
GKN2-202ENST00000481498 MKRN4PQ13434 485 aaPredicted RBP15.85■□□□□ 0.13
GKN2-202ENST00000481498 ABCC9O60706 1549 aa15.79■□□□□ 0.12
GKN2-202ENST00000481498 SLC24A1O60721 1099 aa15.77■□□□□ 0.11
GKN2-202ENST00000481498 AKT1S1Q96B36 256 aa15.74■□□□□ 0.11
GKN2-202ENST00000481498 SPDYE2BA6NHP3 402 aa15.66■□□□□ 0.1
GKN2-202ENST00000481498 SPDYE6P0CI01 402 aa15.66■□□□□ 0.1
GKN2-202ENST00000481498 SPDYE2Q495Y8 402 aa15.66■□□□□ 0.1
GKN2-202ENST00000481498 REM2Q8IYK8 340 aaPredicted RBP15.6■□□□□ 0.09
GKN2-202ENST00000481498 CHRDL2Q6WN34 429 aa15.55■□□□□ 0.08
GKN2-202ENST00000481498 ZNF692Q9BU19 519 aaPredicted RBP15.52■□□□□ 0.08
GKN2-202ENST00000481498 SSUH2Q9Y2M2 353 aa15.52■□□□□ 0.07
GKN2-202ENST00000481498 PITPNM1O00562 1244 aa15.44■□□□□ 0.06
GKN2-202ENST00000481498 PABPN1Q86U42 306 aaKnown RBP eCLIP15.33■□□□□ 0.04
GKN2-202ENST00000481498 NISCHQ9Y2I1 1504 aa15.29■□□□□ 0.04
GKN2-202ENST00000481498 SPDYE1Q8NFV5 336 aaPredicted RBP15.29■□□□□ 0.04
GKN2-202ENST00000481498 PIP4P2Q8N4L2 257 aa15.27■□□□□ 0.03
GKN2-202ENST00000481498 SPDYE4A6NLX3 237 aa15.26■□□□□ 0.03
GKN2-202ENST00000481498 CLEC11AQ9Y240 323 aa15.26■□□□□ 0.03
GKN2-202ENST00000481498 FXR2P51116 673 aaKnown RBP eCLIP15.22■□□□□ 0.03
GKN2-202ENST00000481498 PRR29P0C7W0 189 aa15.04■□□□□ -0
GKN2-202ENST00000481498 PRKAR2AP13861 404 aaKnown RBP15.03■□□□□ -0
GKN2-202ENST00000481498 SP7Q8TDD2 431 aaPredicted RBP14.99□□□□□ -0.01
GKN2-202ENST00000481498 PROM2Q8N271 834 aa14.97□□□□□ -0.01
GKN2-202ENST00000481498 CHADLQ6NUI6 762 aa14.95□□□□□ -0.02
GKN2-202ENST00000481498 STAG3Q9UJ98 1225 aa14.95□□□□□ -0.02
GKN2-202ENST00000481498 HAX1O00165 279 aa14.87□□□□□ -0.03
GKN2-202ENST00000481498 FKBP8Q14318 412 aa14.86□□□□□ -0.03
GKN2-202ENST00000481498 CREBZFQ9NS37 354 aa14.79□□□□□ -0.04
GKN2-202ENST00000481498 FARP1Q9Y4F1 1045 aaPredicted RBP14.76□□□□□ -0.05
GKN2-202ENST00000481498 EVX2Q03828 476 aa14.75□□□□□ -0.05
GKN2-202ENST00000481498 C19orf67A6NJJ6 358 aa14.73□□□□□ -0.05
GKN2-202ENST00000481498 TRIM41Q8WV44 630 aa14.65□□□□□ -0.06
GKN2-202ENST00000481498 MNX1P50219 401 aaPredicted RBP14.59□□□□□ -0.07
GKN2-202ENST00000481498 CD44P16070 742 aaKnown RBP14.57□□□□□ -0.08
GKN2-202ENST00000481498 MIER1Q8N108 512 aa14.5□□□□□ -0.09
GKN2-202ENST00000481498 NPM1P06748 294 aaKnown RBP eCLIP14.49□□□□□ -0.09
GKN2-202ENST00000481498 PLEKHG5O94827 1062 aa14.43□□□□□ -0.1
GKN2-202ENST00000481498 PLCD3Q8N3E9 789 aa14.43□□□□□ -0.1
GKN2-202ENST00000481498 RTN4Q9NQC3 1192 aaKnown RBP14.43□□□□□ -0.1
GKN2-202ENST00000481498 FBXO3Q9UK99 471 aa14.43□□□□□ -0.1
GKN2-202ENST00000481498 ZRANB1Q9UGI0 708 aa14.42□□□□□ -0.1
GKN2-202ENST00000481498 CECR2Q9BXF3 1484 aa14.41□□□□□ -0.1
GKN2-202ENST00000481498 GABBR2O75899 941 aa14.41□□□□□ -0.1
GKN2-202ENST00000481498 RB1CC1Q8TDY2 1594 aa14.39□□□□□ -0.11
GKN2-202ENST00000481498 ZNF579Q8NAF0 562 aaKnown RBP14.38□□□□□ -0.11
GKN2-202ENST00000481498 PAK3O75914 559 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms