Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
NUP43Q8NFH3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 SPDYE19P-201ENST00000338590 713 ntBASIC14.39□□□□□ -0.11
NUP43Q8NFH3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 AC023310.3-201ENST00000557027 670 ntBASIC14.39□□□□□ -0.11
NUP43Q8NFH3 AC100756.1-201ENST00000562736 682 ntBASIC14.39□□□□□ -0.11
NUP43Q8NFH3 AC138749.3-201ENST00000567691 622 ntBASIC14.39□□□□□ -0.11
NUP43Q8NFH3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 SAMD11P1-201ENST00000571429 661 ntBASIC14.39□□□□□ -0.11
NUP43Q8NFH3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 AC116165.1-201ENST00000611806 668 ntBASIC14.39□□□□□ -0.11
NUP43Q8NFH3 AC004790.1-201ENST00000612686 536 ntBASIC14.39□□□□□ -0.11
NUP43Q8NFH3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 AL359258.3-201ENST00000622910 2331 ntBASIC14.39□□□□□ -0.11
NUP43Q8NFH3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 AC097376.2-205ENST00000610159 5334 ntBASIC14.39□□□□□ -0.11
NUP43Q8NFH3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
NUP43Q8NFH3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 FAM86LP-201ENST00000478302 853 ntBASIC14.38□□□□□ -0.11
NUP43Q8NFH3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 INGX-202ENST00000489074 768 ntBASIC14.38□□□□□ -0.11
NUP43Q8NFH3 AC004066.1-201ENST00000502488 802 ntBASIC14.38□□□□□ -0.11
NUP43Q8NFH3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NUP43Q8NFH3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms