Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE1AP54750 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE1AP54750 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.7■□□□□ 0.58
PDE1AP54750 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.7■□□□□ 0.58
PDE1AP54750 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PDE1AP54750 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE1AP54750 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE1AP54750 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDE1AP54750 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE1AP54750 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE1AP54750 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE1AP54750 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDE1AP54750 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE1AP54750 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.7■□□□□ 0.58
PDE1AP54750 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE1AP54750 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.7■□□□□ 0.58
PDE1AP54750 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.7■□□□□ 0.58
PDE1AP54750 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDE1AP54750 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.7■□□□□ 0.58
PDE1AP54750 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.7■□□□□ 0.58
PDE1AP54750 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.7■□□□□ 0.58
PDE1AP54750 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.7■□□□□ 0.58
PDE1AP54750 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.7■□□□□ 0.58
PDE1AP54750 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE1AP54750 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.7■□□□□ 0.58
PDE1AP54750 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.7■□□□□ 0.58
PDE1AP54750 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE1AP54750 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE1AP54750 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE1AP54750 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDE1AP54750 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE1AP54750 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDE1AP54750 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
PDE1AP54750 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDE1AP54750 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE1AP54750 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE1AP54750 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PDE1AP54750 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.69■□□□□ 0.58
PDE1AP54750 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE1AP54750 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PDE1AP54750 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PDE1AP54750 AL137783.1-201ENST00000623494 1896 ntBASIC18.69■□□□□ 0.58
PDE1AP54750 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PDE1AP54750 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE1AP54750 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE1AP54750 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE1AP54750 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDE1AP54750 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PDE1AP54750 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE1AP54750 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE1AP54750 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.69■□□□□ 0.58
PDE1AP54750 PIN1P1-201ENST00000412108 996 ntBASIC18.69■□□□□ 0.58
PDE1AP54750 HMGN1P19-201ENST00000436976 333 ntBASIC18.69■□□□□ 0.58
PDE1AP54750 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.69■□□□□ 0.58
PDE1AP54750 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.69■□□□□ 0.58
PDE1AP54750 AC190387.1-201ENST00000551683 408 ntBASIC18.69■□□□□ 0.58
PDE1AP54750 WASH4P-201ENST00000564273 1246 ntBASIC18.69■□□□□ 0.58
PDE1AP54750 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.69■□□□□ 0.58
PDE1AP54750 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.69■□□□□ 0.58
PDE1AP54750 AC008494.3-201ENST00000606615 944 ntBASIC18.69■□□□□ 0.58
PDE1AP54750 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PDE1AP54750 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.69■□□□□ 0.58
PDE1AP54750 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE1AP54750 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.69■□□□□ 0.58
PDE1AP54750 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE1AP54750 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE1AP54750 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.69■□□□□ 0.58
PDE1AP54750 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDE1AP54750 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE1AP54750 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
PDE1AP54750 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDE1AP54750 AC018529.2-202ENST00000611482 3087 ntBASIC18.68■□□□□ 0.58
PDE1AP54750 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PDE1AP54750 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE1AP54750 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.68■□□□□ 0.58
PDE1AP54750 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE1AP54750 LINC00552-201ENST00000625151 2579 ntBASIC18.68■□□□□ 0.58
PDE1AP54750 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.68■□□□□ 0.58
PDE1AP54750 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE1AP54750 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDE1AP54750 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE1AP54750 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PDE1AP54750 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PDE1AP54750 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.68■□□□□ 0.58
PDE1AP54750 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDE1AP54750 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.68■□□□□ 0.58
PDE1AP54750 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.68■□□□□ 0.58
PDE1AP54750 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.68■□□□□ 0.58
PDE1AP54750 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.68■□□□□ 0.58
PDE1AP54750 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.68■□□□□ 0.58
PDE1AP54750 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PDE1AP54750 BX539320.1-201ENST00000623759 877 ntBASIC18.68■□□□□ 0.58
PDE1AP54750 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.68■□□□□ 0.58
PDE1AP54750 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE1AP54750 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PDE1AP54750 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE1AP54750 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PDE1AP54750 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC18.68■□□□□ 0.58
PDE1AP54750 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDE1AP54750 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms