Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SLC25A1P53007 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.65□□□□□ -0.22
SLC25A1P53007 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SLC25A1P53007 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SLC25A1P53007 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SLC25A1P53007 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SLC25A1P53007 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SLC25A1P53007 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SLC25A1P53007 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SLC25A1P53007 MIR600HG-201ENST00000449175 5984 ntBASIC13.65□□□□□ -0.22
SLC25A1P53007 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
SLC25A1P53007 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
SLC25A1P53007 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
SLC25A1P53007 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
SLC25A1P53007 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SLC25A1P53007 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SLC25A1P53007 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SLC25A1P53007 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SLC25A1P53007 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SLC25A1P53007 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
SLC25A1P53007 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.64□□□□□ -0.23
SLC25A1P53007 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SLC25A1P53007 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SLC25A1P53007 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.64□□□□□ -0.23
SLC25A1P53007 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SLC25A1P53007 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SLC25A1P53007 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SLC25A1P53007 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.64□□□□□ -0.23
SLC25A1P53007 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SLC25A1P53007 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SLC25A1P53007 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SLC25A1P53007 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SLC25A1P53007 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SLC25A1P53007 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SLC25A1P53007 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.64□□□□□ -0.23
SLC25A1P53007 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.64□□□□□ -0.23
SLC25A1P53007 KRT18P13-201ENST00000400056 1290 ntBASIC13.64□□□□□ -0.23
SLC25A1P53007 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.64□□□□□ -0.23
SLC25A1P53007 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SLC25A1P53007 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.64□□□□□ -0.23
SLC25A1P53007 AC004967.1-201ENST00000453589 447 ntBASIC13.64□□□□□ -0.23
SLC25A1P53007 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.64□□□□□ -0.23
SLC25A1P53007 AC125807.1-201ENST00000483097 614 ntBASIC13.64□□□□□ -0.23
SLC25A1P53007 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.64□□□□□ -0.23
SLC25A1P53007 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.64□□□□□ -0.23
SLC25A1P53007 TIMM17BP1-201ENST00000545713 516 ntBASIC13.64□□□□□ -0.23
SLC25A1P53007 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.64□□□□□ -0.23
SLC25A1P53007 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SLC25A1P53007 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SLC25A1P53007 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.64□□□□□ -0.23
SLC25A1P53007 AC044860.1-202ENST00000559481 777 ntBASIC13.64□□□□□ -0.23
SLC25A1P53007 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
SLC25A1P53007 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.64□□□□□ -0.23
SLC25A1P53007 AL844908.2-201ENST00000609461 460 ntBASIC13.64□□□□□ -0.23
SLC25A1P53007 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.64□□□□□ -0.23
SLC25A1P53007 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SLC25A1P53007 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SLC25A1P53007 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SLC25A1P53007 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SLC25A1P53007 AL359258.3-201ENST00000622910 2331 ntBASIC13.64□□□□□ -0.23
SLC25A1P53007 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.64□□□□□ -0.23
SLC25A1P53007 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SLC25A1P53007 BX640514.1-201ENST00000583223 1918 ntBASIC13.64□□□□□ -0.23
SLC25A1P53007 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SLC25A1P53007 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SLC25A1P53007 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.64□□□□□ -0.23
SLC25A1P53007 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SLC25A1P53007 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.64□□□□□ -0.23
SLC25A1P53007 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.64□□□□□ -0.23
SLC25A1P53007 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SLC25A1P53007 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.63□□□□□ -0.23
SLC25A1P53007 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.63□□□□□ -0.23
SLC25A1P53007 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.63□□□□□ -0.23
SLC25A1P53007 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SLC25A1P53007 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SLC25A1P53007 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.63□□□□□ -0.23
SLC25A1P53007 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SLC25A1P53007 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC25A1P53007 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.63□□□□□ -0.23
SLC25A1P53007 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.63□□□□□ -0.23
SLC25A1P53007 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.63□□□□□ -0.23
SLC25A1P53007 TSEN15P1-201ENST00000423257 515 ntBASIC13.63□□□□□ -0.23
SLC25A1P53007 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.63□□□□□ -0.23
SLC25A1P53007 KLF2P3-201ENST00000451977 1087 ntBASIC13.63□□□□□ -0.23
SLC25A1P53007 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.63□□□□□ -0.23
SLC25A1P53007 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms