Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.21□□□□□ -0.45
CDC34P49427 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.21□□□□□ -0.45
CDC34P49427 RPS8P6-201ENST00000426177 609 ntBASIC12.21□□□□□ -0.45
CDC34P49427 PRSS29P-201ENST00000440800 595 ntBASIC12.21□□□□□ -0.45
CDC34P49427 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.21□□□□□ -0.45
CDC34P49427 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.21□□□□□ -0.45
CDC34P49427 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CDC34P49427 AC073648.2-201ENST00000510116 352 ntBASIC12.21□□□□□ -0.45
CDC34P49427 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.21□□□□□ -0.45
CDC34P49427 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.21□□□□□ -0.45
CDC34P49427 AC105339.3-201ENST00000560043 636 ntBASIC12.21□□□□□ -0.45
CDC34P49427 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.21□□□□□ -0.45
CDC34P49427 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.21□□□□□ -0.45
CDC34P49427 AC061975.2-201ENST00000581722 295 ntBASIC12.21□□□□□ -0.45
CDC34P49427 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CDC34P49427 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.21□□□□□ -0.45
CDC34P49427 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
CDC34P49427 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
CDC34P49427 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
CDC34P49427 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.21□□□□□ -0.45
CDC34P49427 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CDC34P49427 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CDC34P49427 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CDC34P49427 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CDC34P49427 AC152010.1-201ENST00000415779 2006 ntBASIC12.21□□□□□ -0.46
CDC34P49427 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CDC34P49427 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.21□□□□□ -0.46
CDC34P49427 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CDC34P49427 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CDC34P49427 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CDC34P49427 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.21□□□□□ -0.46
CDC34P49427 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
CDC34P49427 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
CDC34P49427 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
CDC34P49427 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.21□□□□□ -0.46
CDC34P49427 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CDC34P49427 AC011700.1-201ENST00000610409 2627 ntBASIC12.21□□□□□ -0.46
CDC34P49427 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CDC34P49427 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CDC34P49427 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CDC34P49427 KRT8P37-201ENST00000451609 1420 ntBASIC12.2□□□□□ -0.46
CDC34P49427 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CDC34P49427 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC34P49427 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC34P49427 AC018529.2-202ENST00000611482 3087 ntBASIC12.2□□□□□ -0.46
CDC34P49427 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC34P49427 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC34P49427 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC34P49427 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC12.2□□□□□ -0.46
CDC34P49427 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC34P49427 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CDC34P49427 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC34P49427 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CDC34P49427 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC34P49427 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC34P49427 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
CDC34P49427 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CDC34P49427 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CDC34P49427 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.2□□□□□ -0.46
CDC34P49427 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC12.2□□□□□ -0.46
CDC34P49427 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC34P49427 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.2□□□□□ -0.46
CDC34P49427 DFFB-203ENST00000341385 572 ntTSL 5 BASIC12.2□□□□□ -0.46
CDC34P49427 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC12.2□□□□□ -0.46
CDC34P49427 SAPCD2P3-201ENST00000455031 850 ntBASIC12.2□□□□□ -0.46
CDC34P49427 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.2□□□□□ -0.46
CDC34P49427 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.2□□□□□ -0.46
CDC34P49427 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.2□□□□□ -0.46
CDC34P49427 AL049597.2-201ENST00000565575 961 ntBASIC12.2□□□□□ -0.46
CDC34P49427 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.2□□□□□ -0.46
CDC34P49427 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
CDC34P49427 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CDC34P49427 AC066615.1-201ENST00000640911 628 ntBASIC12.2□□□□□ -0.46
CDC34P49427 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
CDC34P49427 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC34P49427 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC34P49427 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.2□□□□□ -0.46
CDC34P49427 AC084364.1-201ENST00000551967 1556 ntBASIC12.2□□□□□ -0.46
CDC34P49427 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC34P49427 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CDC34P49427 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC34P49427 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.2□□□□□ -0.46
CDC34P49427 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.2□□□□□ -0.46
CDC34P49427 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC34P49427 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.2□□□□□ -0.46
CDC34P49427 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.2□□□□□ -0.46
CDC34P49427 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.2□□□□□ -0.46
CDC34P49427 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
CDC34P49427 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.2□□□□□ -0.46
CDC34P49427 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC34P49427 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CDC34P49427 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC34P49427 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.2□□□□□ -0.46
CDC34P49427 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.2□□□□□ -0.46
CDC34P49427 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CDC34P49427 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms