Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 SEMA4G-201ENST00000210633 4094 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.471e-6■■□□□ 14.1
U2AF2P26368 CAPRIN1-202ENST00000389645 3498 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.194e-9■■□□□ 14.1
U2AF2P26368 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.614e-9■■□□□ 14.1
U2AF2P26368 IGF2BP3-215ENST00000495009 452 ntTSL 41.79□□□□□ -2.121e-8■■□□□ 14.1
U2AF2P26368 PDCD4-210ENST00000492932 813 ntTSL 312.78□□□□□ -0.362e-6■■□□□ 14.1
U2AF2P26368 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.481e-6■■□□□ 14.1
U2AF2P26368 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.058e-7■■□□□ 14.1
U2AF2P26368 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.998e-7■■□□□ 14.1
U2AF2P26368 UBAP2L-212ENST00000465855 684 ntTSL 311.51□□□□□ -0.576e-6■■□□□ 14.1
U2AF2P26368 UBAP2L-214ENST00000475373 838 ntTSL 210.82□□□□□ -0.684e-7■■□□□ 14.1
U2AF2P26368 UBAP2L-215ENST00000484696 611 ntTSL 28.84□□□□□ -0.996e-6■■□□□ 14.1
U2AF2P26368 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.86■□□□□ 0.454e-9■■□□□ 14.1
U2AF2P26368 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.35■□□□□ 0.374e-9■■□□□ 14.1
U2AF2P26368 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.85■□□□□ 0.294e-9■■□□□ 14.1
U2AF2P26368 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.094e-9■■□□□ 14.1
U2AF2P26368 OXA1L-209ENST00000495424 1679 ntTSL 214.1□□□□□ -0.154e-9■■□□□ 14.1
U2AF2P26368 OXA1L-207ENST00000481218 1596 ntTSL 510.21□□□□□ -0.784e-9■■□□□ 14.1
U2AF2P26368 OXA1L-213ENST00000612549 2971 ntTSL 1 (best) BASIC9.66□□□□□ -0.864e-9■■□□□ 14.1
U2AF2P26368 LINC00242-201ENST00000437615 2418 ntTSL 2 BASIC14.37□□□□□ -0.118e-14■■□□□ 14.1
U2AF2P26368 TTC3-213ENST00000469939 739 ntTSL 23.49□□□□□ -1.851e-7■■□□□ 14.1
U2AF2P26368 TTC3-214ENST00000472398 2305 ntTSL 1 (best)3.33□□□□□ -1.881e-7■■□□□ 14.1
U2AF2P26368 TTC3-205ENST00000411496 893 ntTSL 33.09□□□□□ -1.911e-7■■□□□ 14.1
U2AF2P26368 TTC3-220ENST00000487711 925 ntTSL 52.27□□□□□ -2.051e-7■■□□□ 14.1
U2AF2P26368 TRMT11-209ENST00000479748 2093 ntTSL 1 (best)19.36■□□□□ 0.692e-8■■□□□ 14.1
U2AF2P26368 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.352e-8■■□□□ 14.1
U2AF2P26368 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.322e-8■■□□□ 14.1
U2AF2P26368 TRMT11-207ENST00000468097 1009 ntTSL 53.37□□□□□ -1.872e-8■■□□□ 14.1
U2AF2P26368 TRMT11-206ENST00000466316 729 ntTSL 53.23□□□□□ -1.892e-8■■□□□ 14.1
U2AF2P26368 CSNK1A1-201ENST00000261798 6067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.412e-7■■□□□ 14.1
U2AF2P26368 RBM39-241ENST00000496183 632 ntTSL 23.73□□□□□ -1.812e-8■■□□□ 14.1
U2AF2P26368 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.076e-7■■□□□ 14.1
U2AF2P26368 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.46■■□□□ 1.036e-7■■□□□ 14.1
U2AF2P26368 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.016e-7■■□□□ 14.1
U2AF2P26368 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.556e-7■■□□□ 14.1
U2AF2P26368 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.496e-7■■□□□ 14.1
U2AF2P26368 TMEM263-202ENST00000547081 833 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.36e-7■■□□□ 14.1
U2AF2P26368 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.8■□□□□ 0.69e-8■■□□□ 14.1
U2AF2P26368 GIGYF2-216ENST00000428883 544 ntTSL 416.02■□□□□ 0.161e-6■■□□□ 14.1
U2AF2P26368 GIGYF2-225ENST00000463554 1085 ntTSL 514.76□□□□□ -0.051e-6■■□□□ 14.1
U2AF2P26368 GIGYF2-218ENST00000430720 561 ntTSL 411.67□□□□□ -0.541e-6■■□□□ 14.1
U2AF2P26368 GIGYF2-223ENST00000456491 466 ntTSL 47.58□□□□□ -1.21e-6■■□□□ 14.1
U2AF2P26368 GIGYF2-210ENST00000424038 626 ntTSL 37.52□□□□□ -1.211e-6■■□□□ 14.1
U2AF2P26368 GIGYF2-217ENST00000429187 606 ntTSL 37.49□□□□□ -1.211e-6■■□□□ 14.1
U2AF2P26368 GIGYF2-212ENST00000425040 588 ntTSL 47.28□□□□□ -1.241e-6■■□□□ 14.1
U2AF2P26368 GIGYF2-207ENST00000421433 564 ntTSL 56.1□□□□□ -1.431e-6■■□□□ 14.1
U2AF2P26368 HELLS-208ENST00000462057 778 ntTSL 32.64□□□□□ -1.992e-11■■□□□ 14.1
U2AF2P26368 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.583e-9■■□□□ 14.1
U2AF2P26368 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC24.47■■□□□ 1.516e-6■■□□□ 14.1
U2AF2P26368 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.19■□□□□ 0.983e-9■■□□□ 14.1
U2AF2P26368 ATG4B-221ENST00000483778 1103 ntTSL 319.9■□□□□ 0.783e-9■■□□□ 14.1
U2AF2P26368 ATG4B-216ENST00000475195 762 ntTSL 218.58■□□□□ 0.563e-9■■□□□ 14.1
U2AF2P26368 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.563e-9■■□□□ 14.1
U2AF2P26368 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.533e-9■■□□□ 14.1
U2AF2P26368 ATG4B-203ENST00000400772 625 ntTSL 417.71■□□□□ 0.433e-9■■□□□ 14.1
U2AF2P26368 ATG4B-202ENST00000400771 663 ntTSL 517.33■□□□□ 0.363e-9■■□□□ 14.1
U2AF2P26368 ATG4B-215ENST00000468018 721 ntTSL 517.05■□□□□ 0.323e-9■■□□□ 14.1
U2AF2P26368 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.253e-9■■□□□ 14.1
U2AF2P26368 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.256e-6■■□□□ 14.1
U2AF2P26368 NFYC-218ENST00000488635 1481 ntTSL 1 (best)16.48■□□□□ 0.233e-9■■□□□ 14.1
U2AF2P26368 ATG4B-209ENST00000425239 807 ntTSL 216.46■□□□□ 0.233e-9■■□□□ 14.1
U2AF2P26368 ATG4B-223ENST00000493618 899 ntTSL 516.19■□□□□ 0.183e-9■■□□□ 14.1
U2AF2P26368 ATG4B-218ENST00000479554 556 ntTSL 415.85■□□□□ 0.133e-9■■□□□ 14.1
U2AF2P26368 ATG4B-214ENST00000465399 581 ntTSL 215.55■□□□□ 0.083e-9■■□□□ 14.1
U2AF2P26368 NFYC-219ENST00000496608 1965 ntTSL 215.17■□□□□ 0.023e-9■■□□□ 14.1
U2AF2P26368 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.023e-9■■□□□ 14.1
U2AF2P26368 ATG4B-222ENST00000491867 435 ntTSL 515.12■□□□□ 0.013e-9■■□□□ 14.1
U2AF2P26368 EIF2AK4-210ENST00000560855 4789 ntTSL 515□□□□□ -0.013e-9■■□□□ 14.1
U2AF2P26368 OSBPL10-211ENST00000467955 669 ntTSL 314.82□□□□□ -0.043e-9■■□□□ 14.1
U2AF2P26368 ATG4B-208ENST00000419606 553 ntTSL 414.68□□□□□ -0.063e-9■■□□□ 14.1
U2AF2P26368 HCN3-204ENST00000496230 3245 ntTSL 213.69□□□□□ -0.223e-9■■□□□ 14.1
U2AF2P26368 ATG4B-207ENST00000415107 356 ntTSL 513.6□□□□□ -0.233e-9■■□□□ 14.1
U2AF2P26368 OSBPL10-208ENST00000466604 758 ntTSL 313.5□□□□□ -0.253e-9■■□□□ 14.1
U2AF2P26368 ZNFX1-205ENST00000455070 2122 ntTSL 213.19□□□□□ -0.33e-9■■□□□ 14.1
U2AF2P26368 OSBPL10-210ENST00000467647 1078 ntTSL 312.6□□□□□ -0.393e-9■■□□□ 14.1
U2AF2P26368 CCNI-209ENST00000515790 390 ntTSL 212.47□□□□□ -0.413e-9■■□□□ 14.1
U2AF2P26368 EIF2AK4-211ENST00000624709 1314 nt11.65□□□□□ -0.543e-9■■□□□ 14.1
U2AF2P26368 AC078846.1-201ENST00000608694 7083 ntBASIC11.58□□□□□ -0.563e-9■■□□□ 14.1
U2AF2P26368 ATG4B-212ENST00000430617 623 ntTSL 311.29□□□□□ -0.63e-9■■□□□ 14.1
U2AF2P26368 OSBPL10-217ENST00000485205 570 ntTSL 411.26□□□□□ -0.613e-9■■□□□ 14.1
U2AF2P26368 HCN3-203ENST00000492035 532 ntTSL 211.22□□□□□ -0.613e-9■■□□□ 14.1
U2AF2P26368 OSBPL10-202ENST00000428241 519 ntTSL 410.85□□□□□ -0.673e-9■■□□□ 14.1
U2AF2P26368 OSBPL10-216ENST00000480671 492 ntTSL 310.7□□□□□ -0.73e-9■■□□□ 14.1
U2AF2P26368 OSBPL10-203ENST00000429492 7723 ntTSL 29.19□□□□□ -0.943e-9■■□□□ 14.1
U2AF2P26368 CCNI-207ENST00000513774 517 ntTSL 49.01□□□□□ -0.973e-9■■□□□ 14.1
U2AF2P26368 ZNFX1-201ENST00000371744 2964 ntTSL 28.98□□□□□ -0.973e-9■■□□□ 14.1
U2AF2P26368 SHPRH-204ENST00000417762 468 ntTSL 28.84□□□□□ -0.993e-9■■□□□ 14.1
U2AF2P26368 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC8.45□□□□□ -1.063e-9■■□□□ 14.1
U2AF2P26368 CCNI-203ENST00000505609 541 ntTSL 47.8□□□□□ -1.163e-9■■□□□ 14.1
U2AF2P26368 TCP1-204ENST00000467544 658 ntTSL 23.26□□□□□ -1.892e-11■■□□□ 14.1
U2AF2P26368 SNORA29-201ENST00000384183 140 ntBASIC1.15□□□□□ -2.233e-9■■□□□ 14.1
U2AF2P26368 MIR34AHG-202ENST00000635405 529 ntTSL 421.89■■□□□ 1.092e-12■■□□□ 14.1
U2AF2P26368 MIR34AHG-201ENST00000437157 409 ntTSL 520.65■□□□□ 0.92e-12■■□□□ 14.1
U2AF2P26368 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.792e-8■■□□□ 14.1
U2AF2P26368 RBM39-221ENST00000461283 2415 ntTSL 53.76□□□□□ -1.812e-8■■□□□ 14.1
U2AF2P26368 REC8-206ENST00000560032 661 ntTSL 217.44■□□□□ 0.384e-9■■□□□ 14.1
U2AF2P26368 REC8-201ENST00000557806 635 ntTSL 414.28□□□□□ -0.124e-9■■□□□ 14.1
U2AF2P26368 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.91■■□□□ 1.582e-6■■□□□ 14.1
U2AF2P26368 ZNF37BP-204ENST00000473592 2929 ntTSL 1 (best)19.78■□□□□ 0.762e-6■■□□□ 14.1
U2AF2P26368 ZNF37BP-202ENST00000452075 8637 ntTSL 2 BASIC11.59□□□□□ -0.552e-6■■□□□ 14.1
U2AF2P26368 IL1R1-211ENST00000442590 577 ntTSL 313.56□□□□□ -0.246e-8■■□□□ 14.1
Retrieved 100 of 36,523 protein–RNA pairs in 244.3 ms