RNA–Protein interactions for RNA: ENST00000484696.1

UBAP2L-215, Transcript of ubiquitin associated protein 2 like, humanhuman

TSL 2

Gene UBAP2L, Length 611 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2L-215ENST00000484696 AEBP2Q6ZN18 517 aaPredicted RBP23.78■■□□□ 1.4
UBAP2L-215ENST00000484696 CHIC1Q5VXU3 224 aa22.23■■□□□ 1.15
UBAP2L-215ENST00000484696 SENP3Q9H4L4 574 aaPredicted RBP20.43■□□□□ 0.86
UBAP2L-215ENST00000484696 PHF23Q9BUL5 403 aaPredicted RBP20.04■□□□□ 0.8
UBAP2L-215ENST00000484696 NISCHQ9Y2I1 1504 aa19.83■□□□□ 0.77
UBAP2L-215ENST00000484696 POTEDQ86YR6 584 aa19.22■□□□□ 0.67
UBAP2L-215ENST00000484696 FOXD1Q16676 465 aa19.13■□□□□ 0.65
UBAP2L-215ENST00000484696 MSH5O43196 834 aa18.25■□□□□ 0.51
UBAP2L-215ENST00000484696 CCDC180Q9P1Z9 1646 aa17.87■□□□□ 0.45
UBAP2L-215ENST00000484696 PIAS4Q8N2W9 510 aaPredicted RBP17.68■□□□□ 0.42
UBAP2L-215ENST00000484696 ABCC9O60706 1549 aa17.64■□□□□ 0.41
UBAP2L-215ENST00000484696 PPP6R1Q9UPN7 881 aa17.25■□□□□ 0.35
UBAP2L-215ENST00000484696 ADRA2BP18089 450 aa17.14■□□□□ 0.33
UBAP2L-215ENST00000484696 PLPPR3Q6T4P5 718 aa17.02■□□□□ 0.32
UBAP2L-215ENST00000484696 RB1CC1Q8TDY2 1594 aa16.9■□□□□ 0.3
UBAP2L-215ENST00000484696 NACADO15069 1562 aa16.79■□□□□ 0.28
UBAP2L-215ENST00000484696 DCAF8L2P0C7V8 631 aa16.7■□□□□ 0.26
UBAP2L-215ENST00000484696 UNC13AQ9UPW8 1703 aa16.65■□□□□ 0.26
UBAP2L-215ENST00000484696 MYO15BQ96JP2 1530 aa16.55■□□□□ 0.24
UBAP2L-215ENST00000484696 ZCCHC6Q5VYS8 1495 aaKnown RBP16.46■□□□□ 0.23
UBAP2L-215ENST00000484696 PABPN1Q86U42 306 aaKnown RBP eCLIP16.39■□□□□ 0.21
UBAP2L-215ENST00000484696 DCAF1Q9Y4B6 1507 aa16.39■□□□□ 0.21
UBAP2L-215ENST00000484696 BICRAQ9NZM4 1560 aa16.35■□□□□ 0.21
UBAP2L-215ENST00000484696 DNAJC5BQ9UF47 199 aa16.33■□□□□ 0.2
UBAP2L-215ENST00000484696 SCRIBQ14160 1630 aa16.26■□□□□ 0.19
UBAP2L-215ENST00000484696 CACNB1Q02641 598 aaPredicted RBP16.17■□□□□ 0.18
UBAP2L-215ENST00000484696 SHROOM4Q9ULL8 1493 aa16.15■□□□□ 0.18
UBAP2L-215ENST00000484696 DMRT2Q9Y5R5 561 aa16.07■□□□□ 0.16
UBAP2L-215ENST00000484696 MAPK8IP2Q13387 824 aaPredicted RBP15.99■□□□□ 0.15
UBAP2L-215ENST00000484696 CC2D2AQ9P2K1 1620 aa15.98■□□□□ 0.15
UBAP2L-215ENST00000484696 EIF4G1Q04637 1599 aaKnown RBP15.96■□□□□ 0.14
UBAP2L-215ENST00000484696 CECR2Q9BXF3 1484 aa15.87■□□□□ 0.13
UBAP2L-215ENST00000484696 SCAF1Q9H7N4 1312 aaKnown RBP15.7■□□□□ 0.1
UBAP2L-215ENST00000484696 DNAJC5Q9H3Z4 198 aa15.54■□□□□ 0.08
UBAP2L-215ENST00000484696 SMARCA4P51532 1647 aa15.51■□□□□ 0.07
UBAP2L-215ENST00000484696 RNF39Q9H2S5 420 aa15.49■□□□□ 0.07
UBAP2L-215ENST00000484696 SMARCA2P51531 1590 aa15.45■□□□□ 0.06
UBAP2L-215ENST00000484696 DCAF8L1A6NGE4 600 aa15.44■□□□□ 0.06
UBAP2L-215ENST00000484696 BAZ1AQ9NRL2 1556 aaPredicted RBP15.43■□□□□ 0.06
UBAP2L-215ENST00000484696 NCAPD3P42695 1498 aa15.42■□□□□ 0.06
UBAP2L-215ENST00000484696 ATAD2BQ9ULI0 1458 aa15.4■□□□□ 0.06
UBAP2L-215ENST00000484696 HMGXB3Q12766 1538 aa15.39■□□□□ 0.05
UBAP2L-215ENST00000484696 BAZ1BQ9UIG0 1483 aaKnown RBP15.32■□□□□ 0.04
UBAP2L-215ENST00000484696 PEG3Q9GZU2 1588 aa15.31■□□□□ 0.04
UBAP2L-215ENST00000484696 MROH2BQ7Z745 1585 aa15.28■□□□□ 0.04
UBAP2L-215ENST00000484696 ERCC6Q03468 1493 aa15.26■□□□□ 0.03
UBAP2L-215ENST00000484696 C1QBPQ07021 282 aaKnown RBP15.22■□□□□ 0.03
UBAP2L-215ENST00000484696 WIZO95785 1651 aa15.19■□□□□ 0.02
UBAP2L-215ENST00000484696 NESP48681 1621 aa15.18■□□□□ 0.02
UBAP2L-215ENST00000484696 CUX2O14529 1486 aa15.15■□□□□ 0.02
UBAP2L-215ENST00000484696 HOXD11P31277 338 aaPredicted RBP15.15■□□□□ 0.02
UBAP2L-215ENST00000484696 LAMC3Q9Y6N6 1575 aa15.15■□□□□ 0.02
UBAP2L-215ENST00000484696 KIF21AQ7Z4S6 1674 aa15.12■□□□□ 0.01
UBAP2L-215ENST00000484696 THOC2Q8NI27 1593 aaKnown RBP15.06■□□□□ 0
UBAP2L-215ENST00000484696 PDS5BQ9NTI5 1447 aa15□□□□□ -0.01
UBAP2L-215ENST00000484696 RSF1Q96T23 1441 aaPredicted RBP14.97□□□□□ -0.01
UBAP2L-215ENST00000484696 TOP2AP11388 1531 aaKnown RBP14.97□□□□□ -0.01
UBAP2L-215ENST00000484696 CADPSQ9ULU8 1353 aa14.96□□□□□ -0.02
UBAP2L-215ENST00000484696 PRDM2Q13029 1718 aa14.95□□□□□ -0.02
UBAP2L-215ENST00000484696 POTEHQ6S545 545 aa14.91□□□□□ -0.02
UBAP2L-215ENST00000484696 MRC2Q9UBG0 1479 aa14.89□□□□□ -0.03
UBAP2L-215ENST00000484696 CEP164Q9UPV0 1460 aa14.87□□□□□ -0.03
UBAP2L-215ENST00000484696 WDR62O43379 1518 aa14.84□□□□□ -0.03
UBAP2L-215ENST00000484696 KCNA4P22459 653 aa14.84□□□□□ -0.03
UBAP2L-215ENST00000484696 FANCD2Q9BXW9 1451 aa14.83□□□□□ -0.03
UBAP2L-215ENST00000484696 PPP4R3CPQ6ZMV5 832 aa14.82□□□□□ -0.04
UBAP2L-215ENST00000484696 CFTRP13569 1480 aa14.82□□□□□ -0.04
UBAP2L-215ENST00000484696 RNF216Q9NWF9 866 aaPredicted RBP14.81□□□□□ -0.04
UBAP2L-215ENST00000484696 CCDC88BA6NC98 1476 aa14.75□□□□□ -0.05
UBAP2L-215ENST00000484696 CNKSR2Q8WXI2 1034 aa14.72□□□□□ -0.05
UBAP2L-215ENST00000484696 URB2Q14146 1524 aaKnown RBP14.69□□□□□ -0.06
UBAP2L-215ENST00000484696 TRIM41Q8WV44 630 aa14.64□□□□□ -0.07
UBAP2L-215ENST00000484696 TOPBP1Q92547 1522 aa14.57□□□□□ -0.08
UBAP2L-215ENST00000484696 ABCC8Q09428 1581 aa14.57□□□□□ -0.08
UBAP2L-215ENST00000484696 DNMBPQ6XZF7 1577 aa14.57□□□□□ -0.08
UBAP2L-215ENST00000484696 IFT140Q96RY7 1462 aa14.54□□□□□ -0.08
UBAP2L-215ENST00000484696 NCBP3Q53F19 620 aaKnown RBP14.51□□□□□ -0.09
UBAP2L-215ENST00000484696 EIF4G3O43432 1585 aaKnown RBP14.5□□□□□ -0.09
UBAP2L-215ENST00000484696 ZNF608Q9ULD9 1512 aaPredicted RBP14.48□□□□□ -0.09
UBAP2L-215ENST00000484696 TARBP1Q13395 1621 aaKnown RBP14.46□□□□□ -0.09
UBAP2L-215ENST00000484696 CHD1O14646 1710 aa14.46□□□□□ -0.1
UBAP2L-215ENST00000484696 SUPT5HO00267 1087 aaKnown RBP14.45□□□□□ -0.1
UBAP2L-215ENST00000484696 OSCARQ8IYS5 282 aa14.45□□□□□ -0.1
UBAP2L-215ENST00000484696 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.44□□□□□ -0.1
UBAP2L-215ENST00000484696 POLA1P09884 1462 aaPredicted RBP14.42□□□□□ -0.1
UBAP2L-215ENST00000484696 FGD5Q6ZNL6 1462 aa14.37□□□□□ -0.11
UBAP2L-215ENST00000484696 CUX1P39880 1505 aa14.36□□□□□ -0.11
UBAP2L-215ENST00000484696 AQRO60306 1485 aaKnown RBP eCLIP14.36□□□□□ -0.116e-8■■■■□ 23.3
UBAP2L-215ENST00000484696 RAD54L2Q9Y4B4 1467 aa14.36□□□□□ -0.11
UBAP2L-215ENST00000484696 SOGA1O94964 1423 aa14.35□□□□□ -0.11
UBAP2L-215ENST00000484696 WDR97A6NE52 1622 aa14.35□□□□□ -0.11
UBAP2L-215ENST00000484696 RIMBP3CA6NJZ7 1639 aa14.34□□□□□ -0.11
UBAP2L-215ENST00000484696 RIMBP3BA6NNM3 1639 aa14.34□□□□□ -0.11
UBAP2L-215ENST00000484696 RIMBP3Q9UFD9 1639 aa14.34□□□□□ -0.11
UBAP2L-215ENST00000484696 PBRM1Q86U86 1689 aa14.33□□□□□ -0.11
UBAP2L-215ENST00000484696 NPM3O75607 178 aaKnown RBP14.31□□□□□ -0.12
UBAP2L-215ENST00000484696 FBLN2P98095 1184 aa14.28□□□□□ -0.12
UBAP2L-215ENST00000484696 TDRD9Q8NDG6 1382 aaKnown RBP14.28□□□□□ -0.12
UBAP2L-215ENST00000484696 ARHGEF11O15085 1522 aa14.25□□□□□ -0.13
UBAP2L-215ENST00000484696 BIVM-ERCC5R4GMW8 1640 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 227.5 ms