RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 AEBP2Q6ZN18 517 aaPredicted RBP21.53■■□□□ 1.04
TTC3-213ENST00000469939 CHIC1Q5VXU3 224 aa20.33■□□□□ 0.85
TTC3-213ENST00000469939 SENP3Q9H4L4 574 aaPredicted RBP18.44■□□□□ 0.54
TTC3-213ENST00000469939 PHF23Q9BUL5 403 aaPredicted RBP18.18■□□□□ 0.5
TTC3-213ENST00000469939 FOXD1Q16676 465 aa17.17■□□□□ 0.34
TTC3-213ENST00000469939 PLPPR3Q6T4P5 718 aa16.22■□□□□ 0.19
TTC3-213ENST00000469939 MSH5O43196 834 aa16.17■□□□□ 0.18
TTC3-213ENST00000469939 PIAS4Q8N2W9 510 aaPredicted RBP16.08■□□□□ 0.16
TTC3-213ENST00000469939 POTEDQ86YR6 584 aa16■□□□□ 0.15
TTC3-213ENST00000469939 PPP6R1Q9UPN7 881 aa15.94■□□□□ 0.14
TTC3-213ENST00000469939 ADRA2BP18089 450 aa15.92■□□□□ 0.14
TTC3-213ENST00000469939 MAPK8IP2Q13387 824 aaPredicted RBP14.66□□□□□ -0.06
TTC3-213ENST00000469939 SCAF1Q9H7N4 1312 aaKnown RBP14.61□□□□□ -0.07
TTC3-213ENST00000469939 DMRT2Q9Y5R5 561 aa14.57□□□□□ -0.08
TTC3-213ENST00000469939 PPP4R3CPQ6ZMV5 832 aa14.25□□□□□ -0.13
TTC3-213ENST00000469939 DCAF8L1A6NGE4 600 aa14.12□□□□□ -0.15
TTC3-213ENST00000469939 CACNB1Q02641 598 aaPredicted RBP14.01□□□□□ -0.17
TTC3-213ENST00000469939 HOXD11P31277 338 aaPredicted RBP13.96□□□□□ -0.17
TTC3-213ENST00000469939 CNKSR2Q8WXI2 1034 aa13.95□□□□□ -0.18
TTC3-213ENST00000469939 NCBP3Q53F19 620 aaKnown RBP13.87□□□□□ -0.19
TTC3-213ENST00000469939 KCNA4P22459 653 aa13.85□□□□□ -0.19
TTC3-213ENST00000469939 RNF216Q9NWF9 866 aaPredicted RBP13.85□□□□□ -0.19
TTC3-213ENST00000469939 RNF39Q9H2S5 420 aa13.74□□□□□ -0.21
TTC3-213ENST00000469939 NPM3O75607 178 aaKnown RBP13.66□□□□□ -0.22
TTC3-213ENST00000469939 C1QBPQ07021 282 aaKnown RBP13.56□□□□□ -0.24
TTC3-213ENST00000469939 DNAJC5BQ9UF47 199 aa13.47□□□□□ -0.25
TTC3-213ENST00000469939 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.41□□□□□ -0.265e-7■□□□□ 11.3
TTC3-213ENST00000469939 SLC4A1APQ9BWU0 796 aaKnown RBP13.18□□□□□ -0.3
TTC3-213ENST00000469939 U3KPZ7 1027 aaPredicted RBP13.04□□□□□ -0.32
TTC3-213ENST00000469939 CAPN15O75808 1086 aa12.96□□□□□ -0.33
TTC3-213ENST00000469939 SPINK5Q9NQ38 1064 aaPredicted RBP12.91□□□□□ -0.34
TTC3-213ENST00000469939 SLC4A2P04920 1241 aa12.9□□□□□ -0.34
TTC3-213ENST00000469939 DSG3P32926 999 aa12.84□□□□□ -0.35
TTC3-213ENST00000469939 FOXD4L1Q9NU39 408 aa12.77□□□□□ -0.37
TTC3-213ENST00000469939 ZBTB22O15209 634 aa12.74□□□□□ -0.37
TTC3-213ENST00000469939 EHMT2Q96KQ7 1210 aa12.74□□□□□ -0.37
TTC3-213ENST00000469939 APLP2Q06481 763 aa12.73□□□□□ -0.37
TTC3-213ENST00000469939 TRHP20396 242 aaPredicted RBP12.72□□□□□ -0.37
TTC3-213ENST00000469939 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.67□□□□□ -0.38
TTC3-213ENST00000469939 HNRNPUL2Q1KMD3 747 aaKnown RBP12.67□□□□□ -0.38
TTC3-213ENST00000469939 ZNF219Q9P2Y4 722 aaPredicted RBP12.65□□□□□ -0.38
TTC3-213ENST00000469939 ABCB7O75027 752 aa12.63□□□□□ -0.39
TTC3-213ENST00000469939 MYCNP04198 464 aaPredicted RBP12.63□□□□□ -0.39
TTC3-213ENST00000469939 CSRNP3Q8WYN3 585 aa12.62□□□□□ -0.39
TTC3-213ENST00000469939 SAMD1Q6SPF0 538 aaPredicted RBP12.58□□□□□ -0.4
TTC3-213ENST00000469939 POTEHQ6S545 545 aa12.53□□□□□ -0.4
TTC3-213ENST00000469939 ATXN8OSP0DMR3 200 aa12.34□□□□□ -0.43
TTC3-213ENST00000469939 POLA2Q14181 598 aa12.3□□□□□ -0.44
TTC3-213ENST00000469939 RBM42Q9BTD8 480 aaKnown RBP12.3□□□□□ -0.44
TTC3-213ENST00000469939 ATF5Q9Y2D1 282 aaPredicted RBP12.28□□□□□ -0.44
TTC3-213ENST00000469939 CHRDL2Q6WN34 429 aa12.07□□□□□ -0.48
TTC3-213ENST00000469939 ZBTB12Q9Y330 459 aaPredicted RBP12.04□□□□□ -0.48
TTC3-213ENST00000469939 AKT1S1Q96B36 256 aa11.96□□□□□ -0.49
TTC3-213ENST00000469939 OSCARQ8IYS5 282 aa11.92□□□□□ -0.5
TTC3-213ENST00000469939 REM2Q8IYK8 340 aaPredicted RBP11.85□□□□□ -0.51
TTC3-213ENST00000469939 FBLN2P98095 1184 aa11.78□□□□□ -0.52
TTC3-213ENST00000469939 MKRN4PQ13434 485 aaPredicted RBP11.74□□□□□ -0.53
TTC3-213ENST00000469939 PIP4P2Q8N4L2 257 aa11.73□□□□□ -0.53
TTC3-213ENST00000469939 PITPNM1O00562 1244 aa11.72□□□□□ -0.53
TTC3-213ENST00000469939 SP7Q8TDD2 431 aaPredicted RBP11.68□□□□□ -0.54
TTC3-213ENST00000469939 SPDYE2BA6NHP3 402 aa11.64□□□□□ -0.55
TTC3-213ENST00000469939 SPDYE6P0CI01 402 aa11.64□□□□□ -0.55
TTC3-213ENST00000469939 SPDYE2Q495Y8 402 aa11.64□□□□□ -0.55
TTC3-213ENST00000469939 HAX1O00165 279 aa11.63□□□□□ -0.55
TTC3-213ENST00000469939 FXR2P51116 673 aaKnown RBP eCLIP11.62□□□□□ -0.551e-6■■□□□ 12.3
TTC3-213ENST00000469939 CLEC11AQ9Y240 323 aa11.55□□□□□ -0.56
TTC3-213ENST00000469939 ZNF692Q9BU19 519 aaPredicted RBP11.52□□□□□ -0.57
TTC3-213ENST00000469939 SPDYE1Q8NFV5 336 aaPredicted RBP11.5□□□□□ -0.57
TTC3-213ENST00000469939 SPDYE4A6NLX3 237 aa11.46□□□□□ -0.57
TTC3-213ENST00000469939 PRKAR2AP13861 404 aaKnown RBP11.45□□□□□ -0.58
TTC3-213ENST00000469939 SSUH2Q9Y2M2 353 aa11.43□□□□□ -0.58
TTC3-213ENST00000469939 FKBP8Q14318 412 aa11.42□□□□□ -0.58
TTC3-213ENST00000469939 EVX2Q03828 476 aa11.39□□□□□ -0.59
TTC3-213ENST00000469939 PABPN1Q86U42 306 aaKnown RBP eCLIP11.34□□□□□ -0.59
TTC3-213ENST00000469939 PRR29P0C7W0 189 aa11.31□□□□□ -0.6
TTC3-213ENST00000469939 CHADLQ6NUI6 762 aa11.3□□□□□ -0.6
TTC3-213ENST00000469939 C19orf67A6NJJ6 358 aa11.26□□□□□ -0.61
TTC3-213ENST00000469939 PROM2Q8N271 834 aa11.26□□□□□ -0.61
TTC3-213ENST00000469939 GABBR2O75899 941 aa11.16□□□□□ -0.62
TTC3-213ENST00000469939 STAG3Q9UJ98 1225 aa11.13□□□□□ -0.63
TTC3-213ENST00000469939 FARP1Q9Y4F1 1045 aaPredicted RBP11.09□□□□□ -0.63
TTC3-213ENST00000469939 CD44P16070 742 aaKnown RBP11.08□□□□□ -0.64
TTC3-213ENST00000469939 FBXO3Q9UK99 471 aa11.05□□□□□ -0.64
TTC3-213ENST00000469939 LHX8Q68G74 356 aa10.97□□□□□ -0.65
TTC3-213ENST00000469939 CLCN6P51797 869 aa10.92□□□□□ -0.66
TTC3-213ENST00000469939 CREBZFQ9NS37 354 aa10.92□□□□□ -0.66
TTC3-213ENST00000469939 ZRANB1Q9UGI0 708 aa10.92□□□□□ -0.66
TTC3-213ENST00000469939 DCBLD2Q96PD2 775 aa10.89□□□□□ -0.67
TTC3-213ENST00000469939 POTEIP0CG38 1075 aa10.88□□□□□ -0.67
TTC3-213ENST00000469939 VASPP50552 380 aaPredicted RBP10.88□□□□□ -0.67
TTC3-213ENST00000469939 MIER1Q8N108 512 aa10.88□□□□□ -0.67
TTC3-213ENST00000469939 PLCD3Q8N3E9 789 aa10.86□□□□□ -0.67
TTC3-213ENST00000469939 ZNF579Q8NAF0 562 aaKnown RBP10.85□□□□□ -0.67
TTC3-213ENST00000469939 PLEKHG5O94827 1062 aa10.84□□□□□ -0.67
TTC3-213ENST00000469939 PAK3O75914 559 aaPredicted RBP10.83□□□□□ -0.68
TTC3-213ENST00000469939 NPM1P06748 294 aaKnown RBP eCLIP10.78□□□□□ -0.68
TTC3-213ENST00000469939 MNX1P50219 401 aaPredicted RBP10.77□□□□□ -0.69
TTC3-213ENST00000469939 GALR2O43603 387 aaPredicted RBP10.76□□□□□ -0.69
TTC3-213ENST00000469939 ZBTB47Q9UFB7 747 aaPredicted RBP10.75□□□□□ -0.69
TTC3-213ENST00000469939 PHF12Q96QT6 1004 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms