Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SYN1P17600 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SYN1P17600 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYN1P17600 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYN1P17600 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYN1P17600 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
SYN1P17600 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.47■□□□□ 0.23
SYN1P17600 FAM58BP-201ENST00000439056 645 ntBASIC16.47■□□□□ 0.23
SYN1P17600 DDX39AP1-201ENST00000445147 1181 ntBASIC16.47■□□□□ 0.23
SYN1P17600 AC004837.1-201ENST00000446267 564 ntBASIC16.47■□□□□ 0.23
SYN1P17600 AP000358.1-201ENST00000456260 156 ntBASIC16.47■□□□□ 0.23
SYN1P17600 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC16.47■□□□□ 0.23
SYN1P17600 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.47■□□□□ 0.23
SYN1P17600 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.47■□□□□ 0.23
SYN1P17600 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.47■□□□□ 0.23
SYN1P17600 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.47■□□□□ 0.23
SYN1P17600 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC16.47■□□□□ 0.23
SYN1P17600 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SYN1P17600 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC16.47■□□□□ 0.23
SYN1P17600 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SYN1P17600 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.47■□□□□ 0.23
SYN1P17600 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.47■□□□□ 0.23
SYN1P17600 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.47■□□□□ 0.23
SYN1P17600 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYN1P17600 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYN1P17600 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYN1P17600 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYN1P17600 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SYN1P17600 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SYN1P17600 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SYN1P17600 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.46■□□□□ 0.23
SYN1P17600 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SYN1P17600 FRMPD2B-201ENST00000431305 1347 ntBASIC16.46■□□□□ 0.23
SYN1P17600 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
SYN1P17600 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SYN1P17600 AGGF1P2-201ENST00000426656 2106 ntBASIC16.46■□□□□ 0.23
SYN1P17600 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SYN1P17600 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.46■□□□□ 0.23
SYN1P17600 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SYN1P17600 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SYN1P17600 ME2P1-201ENST00000426028 1970 ntBASIC16.46■□□□□ 0.23
SYN1P17600 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
SYN1P17600 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SYN1P17600 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SYN1P17600 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SYN1P17600 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.46■□□□□ 0.23
SYN1P17600 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SYN1P17600 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.46■□□□□ 0.23
SYN1P17600 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.46■□□□□ 0.23
SYN1P17600 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SYN1P17600 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.46■□□□□ 0.23
SYN1P17600 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.46■□□□□ 0.23
SYN1P17600 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.46■□□□□ 0.23
SYN1P17600 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.46■□□□□ 0.23
SYN1P17600 AC130709.1-201ENST00000484779 1212 ntBASIC16.46■□□□□ 0.23
SYN1P17600 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC16.46■□□□□ 0.23
SYN1P17600 AC012158.2-201ENST00000536546 354 ntBASIC16.46■□□□□ 0.23
SYN1P17600 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.46■□□□□ 0.23
SYN1P17600 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SYN1P17600 AL118516.1-201ENST00000564152 670 ntBASIC16.46■□□□□ 0.23
SYN1P17600 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SYN1P17600 MIR3180-2-201ENST00000581748 88 ntBASIC16.46■□□□□ 0.23
SYN1P17600 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.46■□□□□ 0.23
SYN1P17600 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
SYN1P17600 AC011247.3-201ENST00000603297 438 ntBASIC16.46■□□□□ 0.23
SYN1P17600 AC005618.3-201ENST00000624928 458 ntBASIC16.46■□□□□ 0.23
SYN1P17600 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.46■□□□□ 0.23
SYN1P17600 AL603764.1-201ENST00000636452 321 ntBASIC16.46■□□□□ 0.23
SYN1P17600 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.46■□□□□ 0.23
SYN1P17600 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.46■□□□□ 0.23
SYN1P17600 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SYN1P17600 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.46■□□□□ 0.23
SYN1P17600 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SYN1P17600 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SYN1P17600 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SYN1P17600 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SYN1P17600 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
SYN1P17600 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SYN1P17600 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
SYN1P17600 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SYN1P17600 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
SYN1P17600 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.45■□□□□ 0.22
SYN1P17600 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SYN1P17600 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SYN1P17600 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SYN1P17600 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SYN1P17600 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SYN1P17600 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.45■□□□□ 0.22
SYN1P17600 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SYN1P17600 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SYN1P17600 AC079328.2-201ENST00000561241 3354 ntBASIC16.45■□□□□ 0.22
SYN1P17600 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SYN1P17600 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SYN1P17600 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.45■□□□□ 0.22
SYN1P17600 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.45■□□□□ 0.22
SYN1P17600 HCG27-204ENST00000424675 895 ntTSL 3 BASIC16.45■□□□□ 0.22
SYN1P17600 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SYN1P17600 AC012441.2-201ENST00000444843 739 ntBASIC16.45■□□□□ 0.22
SYN1P17600 LYPLA2P1-203ENST00000447689 696 ntBASIC16.45■□□□□ 0.22
SYN1P17600 CHCHD2P9-201ENST00000461726 456 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms