Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC018529.2-202ENST00000611482 3087 ntBASIC17.24■□□□□ 0.35
ACTN4O43707 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACTN4O43707 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.24■□□□□ 0.35
ACTN4O43707 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACTN4O43707 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ACTN4O43707 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.23■□□□□ 0.35
ACTN4O43707 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACTN4O43707 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ACTN4O43707 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ACTN4O43707 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ACTN4O43707 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACTN4O43707 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACTN4O43707 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ACTN4O43707 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ACTN4O43707 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACTN4O43707 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ACTN4O43707 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
ACTN4O43707 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.23■□□□□ 0.35
ACTN4O43707 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ACTN4O43707 AC055876.3-201ENST00000431496 288 ntBASIC17.23■□□□□ 0.35
ACTN4O43707 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.23■□□□□ 0.35
ACTN4O43707 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.23■□□□□ 0.35
ACTN4O43707 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ACTN4O43707 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.23■□□□□ 0.35
ACTN4O43707 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.23■□□□□ 0.35
ACTN4O43707 AC138649.4-201ENST00000612222 287 ntBASIC17.23■□□□□ 0.35
ACTN4O43707 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ACTN4O43707 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACTN4O43707 LILRP1-201ENST00000444199 1370 ntBASIC17.23■□□□□ 0.35
ACTN4O43707 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ACTN4O43707 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ACTN4O43707 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ACTN4O43707 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ACTN4O43707 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.23■□□□□ 0.35
ACTN4O43707 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ACTN4O43707 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
ACTN4O43707 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.23■□□□□ 0.35
ACTN4O43707 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.23■□□□□ 0.35
ACTN4O43707 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.23■□□□□ 0.35
ACTN4O43707 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACTN4O43707 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACTN4O43707 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.22■□□□□ 0.35
ACTN4O43707 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACTN4O43707 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ACTN4O43707 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACTN4O43707 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACTN4O43707 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACTN4O43707 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACTN4O43707 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACTN4O43707 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACTN4O43707 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ACTN4O43707 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.22■□□□□ 0.35
ACTN4O43707 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ACTN4O43707 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACTN4O43707 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.22■□□□□ 0.35
ACTN4O43707 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACTN4O43707 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACTN4O43707 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACTN4O43707 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACTN4O43707 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACTN4O43707 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACTN4O43707 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.22■□□□□ 0.35
ACTN4O43707 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.22■□□□□ 0.35
ACTN4O43707 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.22■□□□□ 0.35
ACTN4O43707 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.22■□□□□ 0.35
ACTN4O43707 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.22■□□□□ 0.35
ACTN4O43707 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.22■□□□□ 0.35
ACTN4O43707 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.22■□□□□ 0.35
ACTN4O43707 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.22■□□□□ 0.35
ACTN4O43707 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACTN4O43707 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ACTN4O43707 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACTN4O43707 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ACTN4O43707 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
ACTN4O43707 AC007787.1-201ENST00000588095 1583 ntBASIC17.22■□□□□ 0.35
ACTN4O43707 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.22■□□□□ 0.35
ACTN4O43707 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ACTN4O43707 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACTN4O43707 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
ACTN4O43707 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
ACTN4O43707 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACTN4O43707 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ACTN4O43707 AL360270.3-201ENST00000609118 1348 ntBASIC17.21■□□□□ 0.35
ACTN4O43707 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ACTN4O43707 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ACTN4O43707 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.21■□□□□ 0.35
ACTN4O43707 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ACTN4O43707 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ACTN4O43707 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.21■□□□□ 0.35
ACTN4O43707 AC005089.1-201ENST00000619486 2241 ntBASIC17.21■□□□□ 0.35
ACTN4O43707 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ACTN4O43707 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ACTN4O43707 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ACTN4O43707 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
ACTN4O43707 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ACTN4O43707 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.21■□□□□ 0.35
ACTN4O43707 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ACTN4O43707 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ACTN4O43707 AL157414.3-201ENST00000624276 1954 ntBASIC17.21■□□□□ 0.35
ACTN4O43707 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms