Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPA2E9PIF3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 BNIP3P42-201ENST00000454982 569 ntBASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 CLUHP6-201ENST00000580789 941 ntBASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 BNIP3P29-201ENST00000598302 571 ntBASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 AC011447.5-201ENST00000616168 564 ntBASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 AC134312.5-201ENST00000568031 1313 ntBASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA2E9PIF3 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
NPIPA2E9PIF3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA2E9PIF3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
NPIPA2E9PIF3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA2E9PIF3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
NPIPA2E9PIF3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.02□□□□□ -0.16
NPIPA2E9PIF3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA2E9PIF3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA2E9PIF3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA2E9PIF3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.02□□□□□ -0.16
NPIPA2E9PIF3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA2E9PIF3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA2E9PIF3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.02□□□□□ -0.16
NPIPA2E9PIF3 AC020658.6-201ENST00000623564 1870 ntBASIC14.02□□□□□ -0.16
NPIPA2E9PIF3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA2E9PIF3 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.02□□□□□ -0.16
NPIPA2E9PIF3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
NPIPA2E9PIF3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.02□□□□□ -0.16
NPIPA2E9PIF3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.02□□□□□ -0.16
NPIPA2E9PIF3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NPIPA2E9PIF3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 AC005229.1-201ENST00000392885 409 ntBASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 BAATP1-201ENST00000412284 1225 ntBASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 AP001889.1-201ENST00000525414 633 ntBASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 AP001063.1-201ENST00000568332 529 ntBASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NPIPA2E9PIF3 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NPIPA2E9PIF3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms