Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TCRBV3S1A0A5B6 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 FO393414.2-201ENST00000405153 598 ntBASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 AC074386.1-202ENST00000463561 864 ntBASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 AL135744.1-201ENST00000565098 629 ntBASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 AP000842.3-202ENST00000569238 1080 ntBASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TCRBV3S1A0A5B6 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 AC090505.1-201ENST00000430515 1834 ntBASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 AC079776.4-201ENST00000511039 504 ntBASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 IGHV3-22-201ENST00000520721 359 ntBASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 AC116407.3-201ENST00000623905 1129 ntBASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 INE2-201ENST00000630399 1874 ntBASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TCRBV3S1A0A5B6 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms