Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.6□□□□□ -0.07
AP4S1Q9Y587 CICP8-201ENST00000455800 2813 ntBASIC14.6□□□□□ -0.07
AP4S1Q9Y587 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 AL122018.1-201ENST00000446607 2310 ntBASIC14.59□□□□□ -0.07
AP4S1Q9Y587 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 AC140658.5-201ENST00000438532 169 ntBASIC14.59□□□□□ -0.07
AP4S1Q9Y587 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 SAPCD2P3-201ENST00000455031 850 ntBASIC14.59□□□□□ -0.07
AP4S1Q9Y587 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 AC066615.1-201ENST00000640911 628 ntBASIC14.59□□□□□ -0.07
AP4S1Q9Y587 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 AL607033.1-201ENST00000623900 1599 ntBASIC14.59□□□□□ -0.07
AP4S1Q9Y587 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
AP4S1Q9Y587 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.07
AP4S1Q9Y587 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
AP4S1Q9Y587 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
AP4S1Q9Y587 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
AP4S1Q9Y587 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
AP4S1Q9Y587 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
AP4S1Q9Y587 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.58□□□□□ -0.07
AP4S1Q9Y587 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 AC138969.3-201ENST00000546612 1459 ntBASIC14.58□□□□□ -0.08
AP4S1Q9Y587 AC138932.2-201ENST00000548268 1459 ntBASIC14.58□□□□□ -0.08
AP4S1Q9Y587 AC126755.4-201ENST00000549796 1459 ntBASIC14.58□□□□□ -0.08
AP4S1Q9Y587 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 AC073648.2-201ENST00000510116 352 ntBASIC14.58□□□□□ -0.08
AP4S1Q9Y587 AF238378.1-201ENST00000526806 358 ntBASIC14.58□□□□□ -0.08
AP4S1Q9Y587 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 AC087388.1-201ENST00000571370 1112 ntBASIC14.58□□□□□ -0.08
AP4S1Q9Y587 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 CYP4F24P-201ENST00000586049 1580 ntBASIC14.58□□□□□ -0.08
AP4S1Q9Y587 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms