Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
AP1S3Q96PC3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 AC080128.2-201ENST00000641520 11863 ntBASIC11.72□□□□□ -0.53
AP1S3Q96PC3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 KRT18P27-201ENST00000427733 1299 ntBASIC11.72□□□□□ -0.53
AP1S3Q96PC3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 IGHV3-65-201ENST00000523210 341 ntBASIC11.72□□□□□ -0.53
AP1S3Q96PC3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 AC021087.4-201ENST00000563761 564 ntBASIC11.72□□□□□ -0.53
AP1S3Q96PC3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 AL358472.4-201ENST00000633140 710 ntBASIC11.72□□□□□ -0.53
AP1S3Q96PC3 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 API5-202ENST00000420461 2009 ntTSL 2 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
AP1S3Q96PC3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 EPHA5-201ENST00000273854 8266 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 AC093724.1-201ENST00000448659 1027 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms