Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC23.02■■□□□ 1.28
CCER1Q8TC90 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCER1Q8TC90 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC23.02■■□□□ 1.27
CCER1Q8TC90 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 LINC01230-201ENST00000625222 3017 ntBASIC23.01■■□□□ 1.27
CCER1Q8TC90 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC23.01■■□□□ 1.27
CCER1Q8TC90 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
CCER1Q8TC90 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
CCER1Q8TC90 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC23.01■■□□□ 1.27
CCER1Q8TC90 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC23.01■■□□□ 1.27
CCER1Q8TC90 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC23.01■■□□□ 1.27
CCER1Q8TC90 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC23.01■■□□□ 1.27
CCER1Q8TC90 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC23.01■■□□□ 1.27
CCER1Q8TC90 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC23.01■■□□□ 1.27
CCER1Q8TC90 UBL5-208ENST00000593087 320 ntTSL 3 BASIC23.01■■□□□ 1.27
CCER1Q8TC90 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC23.01■■□□□ 1.27
CCER1Q8TC90 MIR6069-201ENST00000620069 79 ntBASIC23.01■■□□□ 1.27
CCER1Q8TC90 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC23.01■■□□□ 1.27
CCER1Q8TC90 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC23.01■■□□□ 1.27
CCER1Q8TC90 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
CCER1Q8TC90 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCER1Q8TC90 Z97205.2-201ENST00000564697 1639 ntBASIC23■■□□□ 1.27
CCER1Q8TC90 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC23■■□□□ 1.27
CCER1Q8TC90 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCER1Q8TC90 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CCER1Q8TC90 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CCER1Q8TC90 AC097359.2-201ENST00000604992 2389 ntBASIC23■■□□□ 1.27
CCER1Q8TC90 TK1-203ENST00000588734 1681 ntTSL 2 BASIC23■■□□□ 1.27
CCER1Q8TC90 REXO1L4P-201ENST00000605109 1937 ntBASIC23■■□□□ 1.27
CCER1Q8TC90 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC23■■□□□ 1.27
CCER1Q8TC90 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CCER1Q8TC90 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCER1Q8TC90 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCER1Q8TC90 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCER1Q8TC90 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCER1Q8TC90 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CCER1Q8TC90 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCER1Q8TC90 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC23■■□□□ 1.27
CCER1Q8TC90 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
CCER1Q8TC90 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCER1Q8TC90 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC23■■□□□ 1.27
CCER1Q8TC90 AC023141.5-201ENST00000458585 616 ntBASIC23■■□□□ 1.27
CCER1Q8TC90 SATB1-217ENST00000493952 626 ntTSL 3 BASIC23■■□□□ 1.27
CCER1Q8TC90 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCER1Q8TC90 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCER1Q8TC90 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCER1Q8TC90 AC025048.3-201ENST00000590609 569 ntBASIC23■■□□□ 1.27
CCER1Q8TC90 AC011467.4-201ENST00000594891 528 ntBASIC23■■□□□ 1.27
CCER1Q8TC90 AC005702.4-201ENST00000618393 416 ntBASIC23■■□□□ 1.27
CCER1Q8TC90 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CCER1Q8TC90 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC23■■□□□ 1.27
CCER1Q8TC90 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CCER1Q8TC90 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCER1Q8TC90 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CCER1Q8TC90 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCER1Q8TC90 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
CCER1Q8TC90 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCER1Q8TC90 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCER1Q8TC90 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCER1Q8TC90 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC23■■□□□ 1.27
CCER1Q8TC90 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC23■■□□□ 1.27
CCER1Q8TC90 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCER1Q8TC90 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC22.99■■□□□ 1.27
CCER1Q8TC90 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCER1Q8TC90 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC22.99■■□□□ 1.27
CCER1Q8TC90 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCER1Q8TC90 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCER1Q8TC90 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCER1Q8TC90 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
CCER1Q8TC90 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCER1Q8TC90 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCER1Q8TC90 CETN4P-206ENST00000642099 2168 ntBASIC22.99■■□□□ 1.27
CCER1Q8TC90 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCER1Q8TC90 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCER1Q8TC90 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CCER1Q8TC90 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms