Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.16■□□□□ 0.02
TRIM48Q8IWZ4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.16■□□□□ 0.02
TRIM48Q8IWZ4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM48Q8IWZ4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM48Q8IWZ4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.16■□□□□ 0.02
TRIM48Q8IWZ4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.16■□□□□ 0.02
TRIM48Q8IWZ4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIM48Q8IWZ4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM48Q8IWZ4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIM48Q8IWZ4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
TRIM48Q8IWZ4 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRIM48Q8IWZ4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM48Q8IWZ4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM48Q8IWZ4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM48Q8IWZ4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIM48Q8IWZ4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRIM48Q8IWZ4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRIM48Q8IWZ4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 TDH-203ENST00000531764 1110 ntBASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 AC124283.3-201ENST00000570869 594 ntBASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM48Q8IWZ4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 AC234783.1-201ENST00000441761 496 ntBASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 RAB43P1-201ENST00000561790 589 ntBASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.14■□□□□ 0.01
TRIM48Q8IWZ4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms