Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AC114812.1-204ENST00000449669 728 ntBASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 AC007950.2-201ENST00000615045 2347 ntBASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCN4BQ8IWT1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 AL161772.1-201ENST00000610494 4412 ntBASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 AC148477.4-201ENST00000613430 1793 ntBASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 AC025279.2-201ENST00000569730 653 ntBASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.18■□□□□ 0.18
SCN4BQ8IWT1 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 AC020658.6-201ENST00000623564 1870 ntBASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 AC099336.1-201ENST00000417053 1171 ntBASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 HLA-V-201ENST00000429037 534 ntBASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SCN4BQ8IWT1 AP000812.2-201ENST00000538934 718 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms