Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 IGHV3-62-201ENST00000520057 340 ntBASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 AC091812.2-201ENST00000619081 385 ntBASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NUDCD3Q8IVD9 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NUDCD3Q8IVD9 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NUDCD3Q8IVD9 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.33■□□□□ 0.05
NUDCD3Q8IVD9 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
NUDCD3Q8IVD9 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.33■□□□□ 0.05
NUDCD3Q8IVD9 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
NUDCD3Q8IVD9 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NUDCD3Q8IVD9 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
NUDCD3Q8IVD9 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NUDCD3Q8IVD9 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NUDCD3Q8IVD9 AC126335.2-201ENST00000623362 4637 ntBASIC15.33■□□□□ 0.05
NUDCD3Q8IVD9 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NUDCD3Q8IVD9 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NUDCD3Q8IVD9 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 SPCS2P4-201ENST00000436160 681 ntBASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 SPDYE11-202ENST00000450699 704 ntBASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 LINC01225-203ENST00000563550 1244 ntBASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 SPDYE9P-201ENST00000570642 692 ntBASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 SLC25A6P4-201ENST00000586535 553 ntBASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 SPDYE10P-202ENST00000612005 668 ntBASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 SPDYE8P-202ENST00000612377 668 ntBASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 HLA-A-201ENST00000376802 1334 ntBASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 HSPA7-201ENST00000445535 1927 ntBASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
NUDCD3Q8IVD9 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.32■□□□□ 0.04
NUDCD3Q8IVD9 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms