Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
SCXQ7RTU7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC10.29□□□□□ -0.76
SCXQ7RTU7 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
SCXQ7RTU7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SCXQ7RTU7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC10.29□□□□□ -0.76
SCXQ7RTU7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
SCXQ7RTU7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
SCXQ7RTU7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SCXQ7RTU7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SCXQ7RTU7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC10.29□□□□□ -0.76
SCXQ7RTU7 GK-202ENST00000378941 458 ntTSL 3 BASIC10.29□□□□□ -0.76
SCXQ7RTU7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC10.29□□□□□ -0.76
SCXQ7RTU7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
SCXQ7RTU7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC10.29□□□□□ -0.76
SCXQ7RTU7 AL596325.1-201ENST00000563991 1082 ntBASIC10.29□□□□□ -0.76
SCXQ7RTU7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC10.29□□□□□ -0.76
SCXQ7RTU7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC10.29□□□□□ -0.76
SCXQ7RTU7 AC004840.1-201ENST00000636359 365 ntBASIC10.29□□□□□ -0.76
SCXQ7RTU7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SCXQ7RTU7 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SCXQ7RTU7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
SCXQ7RTU7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
SCXQ7RTU7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SCXQ7RTU7 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SCXQ7RTU7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC10.29□□□□□ -0.76
SCXQ7RTU7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
SCXQ7RTU7 HLA-A-202ENST00000376806 1854 ntBASIC10.29□□□□□ -0.76
SCXQ7RTU7 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SCXQ7RTU7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SCXQ7RTU7 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC10.29□□□□□ -0.76
SCXQ7RTU7 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
SCXQ7RTU7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC10.29□□□□□ -0.76
SCXQ7RTU7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SCXQ7RTU7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC10.29□□□□□ -0.76
SCXQ7RTU7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SCXQ7RTU7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
SCXQ7RTU7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SCXQ7RTU7 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
SCXQ7RTU7 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 AC106881.1-201ENST00000605849 3329 ntBASIC10.28□□□□□ -0.76
SCXQ7RTU7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 COX5BP8-201ENST00000416911 349 ntBASIC10.28□□□□□ -0.76
SCXQ7RTU7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 KRT17P7-201ENST00000451704 1104 ntBASIC10.28□□□□□ -0.76
SCXQ7RTU7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 AC140912.1-201ENST00000577171 1054 ntBASIC10.28□□□□□ -0.76
SCXQ7RTU7 AC061975.2-201ENST00000581722 295 ntBASIC10.28□□□□□ -0.76
SCXQ7RTU7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC10.28□□□□□ -0.76
SCXQ7RTU7 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SCXQ7RTU7 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC10.28□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms