Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RIPPLY3P57055 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RIPPLY3P57055 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RIPPLY3P57055 AC009949.1-201ENST00000623048 1830 ntBASIC12.84□□□□□ -0.35
RIPPLY3P57055 AMT-250ENST00000637682 1823 ntTSL 5 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RIPPLY3P57055 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RIPPLY3P57055 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 ACTG1P2-201ENST00000415776 1125 ntBASIC12.84□□□□□ -0.35
RIPPLY3P57055 ACTG1P11-201ENST00000425411 1125 ntBASIC12.84□□□□□ -0.35
RIPPLY3P57055 AC053503.3-201ENST00000448375 114 ntBASIC12.84□□□□□ -0.35
RIPPLY3P57055 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RIPPLY3P57055 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 HKR1-225ENST00000592168 566 ntTSL 4 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 AC005252.2-201ENST00000624630 1141 ntBASIC12.84□□□□□ -0.35
RIPPLY3P57055 AL645728.2-202ENST00000641679 227 ntBASIC12.84□□□□□ -0.35
RIPPLY3P57055 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RIPPLY3P57055 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RIPPLY3P57055 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RIPPLY3P57055 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RIPPLY3P57055 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.84□□□□□ -0.35
RIPPLY3P57055 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RIPPLY3P57055 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RIPPLY3P57055 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC12.84□□□□□ -0.35
RIPPLY3P57055 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RIPPLY3P57055 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RIPPLY3P57055 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RIPPLY3P57055 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RIPPLY3P57055 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RIPPLY3P57055 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
RIPPLY3P57055 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
RIPPLY3P57055 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
RIPPLY3P57055 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.83□□□□□ -0.35
RIPPLY3P57055 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
RIPPLY3P57055 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RIPPLY3P57055 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RIPPLY3P57055 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
RIPPLY3P57055 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RIPPLY3P57055 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RIPPLY3P57055 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RIPPLY3P57055 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RIPPLY3P57055 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC12.83□□□□□ -0.36
RIPPLY3P57055 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RIPPLY3P57055 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
RIPPLY3P57055 FO393414.2-201ENST00000405153 598 ntBASIC12.83□□□□□ -0.36
RIPPLY3P57055 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC12.83□□□□□ -0.36
RIPPLY3P57055 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC12.83□□□□□ -0.36
RIPPLY3P57055 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC12.83□□□□□ -0.36
RIPPLY3P57055 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RIPPLY3P57055 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.83□□□□□ -0.36
RIPPLY3P57055 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RIPPLY3P57055 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.83□□□□□ -0.36
RIPPLY3P57055 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
RIPPLY3P57055 RN7SL846P-201ENST00000467429 292 ntBASIC12.83□□□□□ -0.36
RIPPLY3P57055 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RIPPLY3P57055 SCARNA21-201ENST00000517026 139 ntBASIC12.83□□□□□ -0.36
RIPPLY3P57055 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC12.83□□□□□ -0.36
RIPPLY3P57055 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC12.83□□□□□ -0.36
RIPPLY3P57055 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC12.83□□□□□ -0.36
RIPPLY3P57055 AC020922.3-201ENST00000595064 547 ntBASIC12.83□□□□□ -0.36
RIPPLY3P57055 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.83□□□□□ -0.36
RIPPLY3P57055 AC004686.1-201ENST00000605113 538 ntBASIC12.83□□□□□ -0.36
RIPPLY3P57055 AC132938.4-201ENST00000623835 848 ntBASIC12.83□□□□□ -0.36
RIPPLY3P57055 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RIPPLY3P57055 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
RIPPLY3P57055 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
RIPPLY3P57055 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC12.83□□□□□ -0.36
RIPPLY3P57055 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.83□□□□□ -0.36
RIPPLY3P57055 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
RIPPLY3P57055 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RIPPLY3P57055 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.83□□□□□ -0.36
RIPPLY3P57055 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
RIPPLY3P57055 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RIPPLY3P57055 AC004554.1-201ENST00000422830 1468 ntBASIC12.83□□□□□ -0.36
RIPPLY3P57055 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
RIPPLY3P57055 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RIPPLY3P57055 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RIPPLY3P57055 AC074138.1-201ENST00000611182 1303 ntBASIC12.83□□□□□ -0.36
RIPPLY3P57055 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms