Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.6□□□□□ -0.07
LAMP1P11279 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.6□□□□□ -0.07
LAMP1P11279 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LAMP1P11279 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LAMP1P11279 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LAMP1P11279 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LAMP1P11279 AC140479.7-201ENST00000636301 2332 ntBASIC14.6□□□□□ -0.07
LAMP1P11279 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
LAMP1P11279 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
LAMP1P11279 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LAMP1P11279 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LAMP1P11279 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LAMP1P11279 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.6□□□□□ -0.07
LAMP1P11279 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LAMP1P11279 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.6□□□□□ -0.07
LAMP1P11279 AC005912.2-201ENST00000619492 2400 ntBASIC14.6□□□□□ -0.07
LAMP1P11279 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LAMP1P11279 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.6□□□□□ -0.07
LAMP1P11279 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
LAMP1P11279 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LAMP1P11279 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LAMP1P11279 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LAMP1P11279 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LAMP1P11279 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LAMP1P11279 AC100757.3-201ENST00000622361 1406 ntBASIC14.59□□□□□ -0.07
LAMP1P11279 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.59□□□□□ -0.07
LAMP1P11279 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LAMP1P11279 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LAMP1P11279 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LAMP1P11279 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.59□□□□□ -0.07
LAMP1P11279 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LAMP1P11279 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LAMP1P11279 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LAMP1P11279 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LAMP1P11279 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LAMP1P11279 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LAMP1P11279 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LAMP1P11279 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LAMP1P11279 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LAMP1P11279 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LAMP1P11279 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LAMP1P11279 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.59□□□□□ -0.07
LAMP1P11279 TREML5P-201ENST00000421694 576 ntBASIC14.59□□□□□ -0.07
LAMP1P11279 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.59□□□□□ -0.07
LAMP1P11279 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.59□□□□□ -0.07
LAMP1P11279 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.59□□□□□ -0.07
LAMP1P11279 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.59□□□□□ -0.07
LAMP1P11279 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.59□□□□□ -0.07
LAMP1P11279 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.59□□□□□ -0.07
LAMP1P11279 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.59□□□□□ -0.07
LAMP1P11279 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.59□□□□□ -0.07
LAMP1P11279 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.59□□□□□ -0.07
LAMP1P11279 AL590560.3-201ENST00000623350 461 ntBASIC14.59□□□□□ -0.07
LAMP1P11279 AC004461.2-201ENST00000629517 803 ntBASIC14.59□□□□□ -0.07
LAMP1P11279 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LAMP1P11279 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LAMP1P11279 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LAMP1P11279 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LAMP1P11279 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LAMP1P11279 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.59□□□□□ -0.07
LAMP1P11279 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.59□□□□□ -0.07
LAMP1P11279 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LAMP1P11279 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LAMP1P11279 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
LAMP1P11279 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LAMP1P11279 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LAMP1P11279 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LAMP1P11279 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LAMP1P11279 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.58□□□□□ -0.07
LAMP1P11279 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LAMP1P11279 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
LAMP1P11279 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.58□□□□□ -0.07
LAMP1P11279 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.58□□□□□ -0.07
LAMP1P11279 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LAMP1P11279 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.07
LAMP1P11279 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
LAMP1P11279 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.58□□□□□ -0.07
LAMP1P11279 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
LAMP1P11279 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
LAMP1P11279 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LAMP1P11279 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LAMP1P11279 AC139749.1-202ENST00000617529 3139 ntBASIC14.58□□□□□ -0.08
LAMP1P11279 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LAMP1P11279 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LAMP1P11279 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LAMP1P11279 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.58□□□□□ -0.08
LAMP1P11279 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.58□□□□□ -0.08
LAMP1P11279 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LAMP1P11279 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.58□□□□□ -0.08
LAMP1P11279 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.58□□□□□ -0.08
LAMP1P11279 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LAMP1P11279 ZNF890P-202ENST00000530367 1156 ntBASIC14.58□□□□□ -0.08
LAMP1P11279 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LAMP1P11279 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.08
LAMP1P11279 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.58□□□□□ -0.08
LAMP1P11279 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.58□□□□□ -0.08
LAMP1P11279 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LAMP1P11279 AP001160.2-201ENST00000596071 487 ntBASIC14.58□□□□□ -0.08
LAMP1P11279 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LAMP1P11279 AC000095.1-201ENST00000603208 874 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms