Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 KCNAB2-201ENST00000164247 4273 ntAPPRIS P4 TSL 2 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 STAG1-203ENST00000434713 5064 ntTSL 5 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 ABCC8-202ENST00000389817 4921 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 SNRK-202ENST00000429705 5128 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CHKB-CPT1BH3BT56 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 ZKSCAN3-201ENST00000252211 4725 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 KLHL6-201ENST00000341319 6298 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 KRT16P1-201ENST00000399124 1418 ntBASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 CACNA1C-202ENST00000335762 6968 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 HADH-202ENST00000403312 1752 ntTSL 5 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 SFXN2-201ENST00000369893 6866 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 METTL26-203ENST00000397664 604 ntTSL 2 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 KSR1P1-201ENST00000446298 240 ntBASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 AC091874.3-201ENST00000512672 1195 ntBASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 CYGB-204ENST00000589342 815 ntTSL 3 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 AC124016.1-201ENST00000609552 612 ntBASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 PAM-203ENST00000346918 3302 ntTSL 5 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 SLC6A4-201ENST00000261707 6604 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 CADM2-201ENST00000383699 9488 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 SALL1-202ENST00000440970 5253 ntTSL 5 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHKB-CPT1BH3BT56 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 MAPT-IT1-201ENST00000624111 3016 ntBASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 CDHR1-206ENST00000623527 6781 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 TACR1-201ENST00000305249 4959 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CHKB-CPT1BH3BT56 LOX-206ENST00000639739 1626 ntTSL 5 BASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms