RNA–Protein interactions for RNA: ENST00000623527.3

CDHR1-206, Transcript of cadherin related family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDHR1, Length 6,781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1-206ENST00000623527 DCAF8L2P0C7V8 631 aa18.66■□□□□ 0.58
CDHR1-206ENST00000623527 SUPT5HO00267 1087 aaKnown RBP17.84■□□□□ 0.45
CDHR1-206ENST00000623527 EHMT2Q96KQ7 1210 aa17.77■□□□□ 0.44
CDHR1-206ENST00000623527 PELP1Q8IZL8 1130 aaKnown RBP17.38■□□□□ 0.37
CDHR1-206ENST00000623527 SHROOM4Q9ULL8 1493 aa17.34■□□□□ 0.37
CDHR1-206ENST00000623527 TTBK1Q5TCY1 1321 aaPredicted RBP17.18■□□□□ 0.34
CDHR1-206ENST00000623527 PCGF6Q9BYE7 350 aa17■□□□□ 0.31
CDHR1-206ENST00000623527 FAM9AQ8IZU1 332 aaPredicted RBP16.99■□□□□ 0.31
CDHR1-206ENST00000623527 APLP2Q06481 763 aa16.94■□□□□ 0.3
CDHR1-206ENST00000623527 ERICH6Q7L0X2 663 aa16.94■□□□□ 0.3
CDHR1-206ENST00000623527 NISCHQ9Y2I1 1504 aa16.86■□□□□ 0.29
CDHR1-206ENST00000623527 RANGAP1P46060 587 aaPredicted RBP16.78■□□□□ 0.28
CDHR1-206ENST00000623527 CENPBP07199 599 aaPredicted RBP16.73■□□□□ 0.27
CDHR1-206ENST00000623527 YTHDC1Q96MU7 727 aaKnown RBP16.69■□□□□ 0.26
CDHR1-206ENST00000623527 CCER1Q8TC90 406 aaPredicted RBP16.62■□□□□ 0.25
CDHR1-206ENST00000623527 MYT1Q01538 1121 aa16.52■□□□□ 0.24
CDHR1-206ENST00000623527 ATP1B4Q9UN42 357 aaPredicted RBP16.51■□□□□ 0.23
CDHR1-206ENST00000623527 NEFLP07196 543 aa16.42■□□□□ 0.22
CDHR1-206ENST00000623527 PPARGC1BQ86YN6 1023 aaKnown RBP16.41■□□□□ 0.22
CDHR1-206ENST00000623527 ZEB1P37275 1124 aaPredicted RBP16.36■□□□□ 0.21
CDHR1-206ENST00000623527 TRIM41Q8WV44 630 aa16.28■□□□□ 0.2
CDHR1-206ENST00000623527 UBTFP17480 764 aaKnown RBP16.24■□□□□ 0.19
CDHR1-206ENST00000623527 HRCP23327 699 aa16.17■□□□□ 0.18
CDHR1-206ENST00000623527 CNGB1Q14028 1251 aaPredicted RBP16.16■□□□□ 0.18
CDHR1-206ENST00000623527 POLR3GLQ9BT43 218 aa16.1■□□□□ 0.17
CDHR1-206ENST00000623527 DAXXQ9UER7 740 aaPredicted RBP16.06■□□□□ 0.16
CDHR1-206ENST00000623527 ITGAEP38570 1179 aa16.03■□□□□ 0.16
CDHR1-206ENST00000623527 TRIM26Q12899 539 aaPredicted RBP15.88■□□□□ 0.13
CDHR1-206ENST00000623527 HNRNPUL2Q1KMD3 747 aaKnown RBP15.84■□□□□ 0.13
CDHR1-206ENST00000623527 LOC105371045A0A1W2PR82 267 aa15.81■□□□□ 0.12
CDHR1-206ENST00000623527 MYT1LQ9UL68 1186 aa15.81■□□□□ 0.12
CDHR1-206ENST00000623527 CHIC1Q5VXU3 224 aa15.79■□□□□ 0.12
CDHR1-206ENST00000623527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.75■□□□□ 0.11
CDHR1-206ENST00000623527 RTL5Q5HYW3 569 aaPredicted RBP15.74■□□□□ 0.11
CDHR1-206ENST00000623527 CLSPNQ9HAW4 1339 aa15.72■□□□□ 0.11
CDHR1-206ENST00000623527 BCANQ96GW7 911 aa15.71■□□□□ 0.11
CDHR1-206ENST00000623527 SLC4A1APQ9BWU0 796 aaKnown RBP15.71■□□□□ 0.11
CDHR1-206ENST00000623527 ZNF316A6NFI3 1004 aaPredicted RBP15.7■□□□□ 0.1
CDHR1-206ENST00000623527 DIEXFQ68CQ4 756 aaKnown RBP15.63■□□□□ 0.09
CDHR1-206ENST00000623527 GTF3C3Q9Y5Q9 886 aa15.54■□□□□ 0.08
CDHR1-206ENST00000623527 BCL11AQ9H165 835 aa15.52■□□□□ 0.08
CDHR1-206ENST00000623527 NEUROD1Q13562 356 aa15.44■□□□□ 0.06
CDHR1-206ENST00000623527 FAM50AQ14320 339 aaKnown RBP15.38■□□□□ 0.05
CDHR1-206ENST00000623527 ZNF326Q5BKZ1 582 aaKnown RBP15.34■□□□□ 0.05
CDHR1-206ENST00000623527 TRIM52Q96A61 297 aa15.33■□□□□ 0.04
CDHR1-206ENST00000623527 CDK11AQ9UQ88 783 aaPredicted RBP15.32■□□□□ 0.04
CDHR1-206ENST00000623527 EIF5BO60841 1220 aaKnown RBP15.28■□□□□ 0.04
CDHR1-206ENST00000623527 SLC24A1O60721 1099 aa15.25■□□□□ 0.03
CDHR1-206ENST00000623527 NPM2Q86SE8 214 aaKnown RBP15.25■□□□□ 0.03
CDHR1-206ENST00000623527 ANP32CO43423 234 aa15.22■□□□□ 0.03
CDHR1-206ENST00000623527 ACIN1Q9UKV3 1341 aaKnown RBP15.2■□□□□ 0.02
CDHR1-206ENST00000623527 ZBTB47Q9UFB7 747 aaPredicted RBP15.2■□□□□ 0.02
CDHR1-206ENST00000623527 CANXP27824 592 aaKnown RBP15.17■□□□□ 0.02
CDHR1-206ENST00000623527 SCAF1Q9H7N4 1312 aaKnown RBP15.12■□□□□ 0.01
CDHR1-206ENST00000623527 ANP32AP39687 249 aaKnown RBP15.09■□□□□ 0.01
CDHR1-206ENST00000623527 ARXQ96QS3 562 aa15.04■□□□□ -0
CDHR1-206ENST00000623527 FKBP8Q14318 412 aa15.02■□□□□ -0
CDHR1-206ENST00000623527 ARID3CA6NKF2 412 aa15.02□□□□□ -0.01
CDHR1-206ENST00000623527 NBR1Q14596 966 aa15□□□□□ -0.01
CDHR1-206ENST00000623527 SALL2Q9Y467 1007 aaPredicted RBP14.97□□□□□ -0.01
CDHR1-206ENST00000623527 HSP90AA1P07900 732 aaKnown RBP14.93□□□□□ -0.02
CDHR1-206ENST00000623527 P3H3Q8IVL6 736 aa14.92□□□□□ -0.02
CDHR1-206ENST00000623527 FBLN2P98095 1184 aa14.89□□□□□ -0.03
CDHR1-206ENST00000623527 NEFMP07197 916 aa14.89□□□□□ -0.03
CDHR1-206ENST00000623527 ANP32BQ92688 251 aaKnown RBP14.88□□□□□ -0.03
CDHR1-206ENST00000623527 FAM9BQ8IZU0 186 aa14.87□□□□□ -0.03
CDHR1-206ENST00000623527 HNRNPUQ00839 825 aaKnown RBP eCLIP14.87□□□□□ -0.03
CDHR1-206ENST00000623527 IRX6P78412 446 aaPredicted RBP14.82□□□□□ -0.04
CDHR1-206ENST00000623527 DDX10Q13206 875 aaKnown RBP14.81□□□□□ -0.04
CDHR1-206ENST00000623527 ZNF777Q9ULD5 760 aaPredicted RBP14.81□□□□□ -0.04
CDHR1-206ENST00000623527 PABPN1Q86U42 306 aaKnown RBP eCLIP14.79□□□□□ -0.04
CDHR1-206ENST00000623527 GLIPR1L2Q4G1C9 344 aa14.75□□□□□ -0.05
CDHR1-206ENST00000623527 UPF2Q9HAU5 1272 aaKnown RBP14.74□□□□□ -0.05
CDHR1-206ENST00000623527 PLPPR3Q6T4P5 718 aa14.74□□□□□ -0.05
CDHR1-206ENST00000623527 CCDC136Q96JN2 1154 aa14.74□□□□□ -0.05
CDHR1-206ENST00000623527 DCAF1Q9Y4B6 1507 aa14.73□□□□□ -0.05
CDHR1-206ENST00000623527 CHGAP10645 457 aaKnown RBP14.71□□□□□ -0.05
CDHR1-206ENST00000623527 SENP3-EIF4A1A0A087X0R7 540 aa14.71□□□□□ -0.06
CDHR1-206ENST00000623527 MYO15BQ96JP2 1530 aa14.69□□□□□ -0.06
CDHR1-206ENST00000623527 HIRIP3Q9BW71 556 aaPredicted RBP14.69□□□□□ -0.06
CDHR1-206ENST00000623527 TONSLQ96HA7 1378 aa14.62□□□□□ -0.07
CDHR1-206ENST00000623527 ABCC9O60706 1549 aa14.62□□□□□ -0.07
CDHR1-206ENST00000623527 TMC1Q8TDI8 760 aa14.62□□□□□ -0.07
CDHR1-206ENST00000623527 SENP3Q9H4L4 574 aaPredicted RBP14.61□□□□□ -0.07
CDHR1-206ENST00000623527 MIER1Q8N108 512 aa14.59□□□□□ -0.07
CDHR1-206ENST00000623527 RTN4Q9NQC3 1192 aaKnown RBP14.58□□□□□ -0.08
CDHR1-206ENST00000623527 TPRNQ4KMQ1 711 aa14.57□□□□□ -0.08
CDHR1-206ENST00000623527 MRS2Q9HD23 443 aa14.57□□□□□ -0.08
CDHR1-206ENST00000623527 CHIC2Q9UKJ5 165 aa14.57□□□□□ -0.08
CDHR1-206ENST00000623527 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.57□□□□□ -0.08
CDHR1-206ENST00000623527 PLEKHG5O94827 1062 aa14.56□□□□□ -0.08
CDHR1-206ENST00000623527 STAG3Q9UJ98 1225 aa14.55□□□□□ -0.08
CDHR1-206ENST00000623527 KDM2AQ9Y2K7 1162 aa14.54□□□□□ -0.08
CDHR1-206ENST00000623527 CSRNP3Q8WYN3 585 aa14.54□□□□□ -0.08
CDHR1-206ENST00000623527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.53□□□□□ -0.08
CDHR1-206ENST00000623527 WDR43Q15061 677 aaKnown RBP eCLIP14.5□□□□□ -0.09
CDHR1-206ENST00000623527 A0A0G2JS52 829 aa14.49□□□□□ -0.09
CDHR1-206ENST00000623527 TRIM44Q96DX7 344 aaPredicted RBP14.47□□□□□ -0.09
CDHR1-206ENST00000623527 ESF1Q9H501 851 aaKnown RBP14.47□□□□□ -0.09
CDHR1-206ENST00000623527 NCLP19338 710 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms