RNA–Protein interactions for RNA: ENST00000369893.9

SFXN2-201, Transcript of sideroflexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN2, Length 6,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-201ENST00000369893 DCAF8L2P0C7V8 631 aa17.22■□□□□ 0.35
SFXN2-201ENST00000369893 PELP1Q8IZL8 1130 aaKnown RBP17.05■□□□□ 0.32
SFXN2-201ENST00000369893 ERICH6Q7L0X2 663 aa16.44■□□□□ 0.22
SFXN2-201ENST00000369893 SUPT5HO00267 1087 aaKnown RBP16.43■□□□□ 0.22
SFXN2-201ENST00000369893 NISCHQ9Y2I1 1504 aa16.35■□□□□ 0.21
SFXN2-201ENST00000369893 EHMT2Q96KQ7 1210 aa16.28■□□□□ 0.2
SFXN2-201ENST00000369893 CCER1Q8TC90 406 aaPredicted RBP16.26■□□□□ 0.19
SFXN2-201ENST00000369893 APLP2Q06481 763 aa16.14■□□□□ 0.17
SFXN2-201ENST00000369893 MYT1Q01538 1121 aa16.06■□□□□ 0.16
SFXN2-201ENST00000369893 CENPBP07199 599 aaPredicted RBP16.04■□□□□ 0.16
SFXN2-201ENST00000369893 SHROOM4Q9ULL8 1493 aa15.88■□□□□ 0.13
SFXN2-201ENST00000369893 FAM9AQ8IZU1 332 aaPredicted RBP15.84■□□□□ 0.13
SFXN2-201ENST00000369893 TTBK1Q5TCY1 1321 aaPredicted RBP15.81■□□□□ 0.12
SFXN2-201ENST00000369893 NEFLP07196 543 aa15.79■□□□□ 0.12
SFXN2-201ENST00000369893 PCGF6Q9BYE7 350 aa15.77■□□□□ 0.12
SFXN2-201ENST00000369893 ZEB1P37275 1124 aaPredicted RBP15.71■□□□□ 0.11
SFXN2-201ENST00000369893 YTHDC1Q96MU7 727 aaKnown RBP15.6■□□□□ 0.09
SFXN2-201ENST00000369893 DAXXQ9UER7 740 aaPredicted RBP15.56■□□□□ 0.08
SFXN2-201ENST00000369893 RANGAP1P46060 587 aaPredicted RBP15.48■□□□□ 0.07
SFXN2-201ENST00000369893 ATP1B4Q9UN42 357 aaPredicted RBP15.45■□□□□ 0.06
SFXN2-201ENST00000369893 RTL5Q5HYW3 569 aaPredicted RBP15.19■□□□□ 0.02
SFXN2-201ENST00000369893 TRIM41Q8WV44 630 aa15.17■□□□□ 0.02
SFXN2-201ENST00000369893 ZNF316A6NFI3 1004 aaPredicted RBP15.17■□□□□ 0.02
SFXN2-201ENST00000369893 UBTFP17480 764 aaKnown RBP15.16■□□□□ 0.02
SFXN2-201ENST00000369893 POLR3GLQ9BT43 218 aa15.11■□□□□ 0.01
SFXN2-201ENST00000369893 CLSPNQ9HAW4 1339 aa15.01□□□□□ -0.01
SFXN2-201ENST00000369893 PPARGC1BQ86YN6 1023 aaKnown RBP14.97□□□□□ -0.01
SFXN2-201ENST00000369893 MYT1LQ9UL68 1186 aa14.94□□□□□ -0.02
SFXN2-201ENST00000369893 CNGB1Q14028 1251 aaPredicted RBP14.94□□□□□ -0.02
SFXN2-201ENST00000369893 HRCP23327 699 aa14.91□□□□□ -0.02
SFXN2-201ENST00000369893 TRIM26Q12899 539 aaPredicted RBP14.91□□□□□ -0.02
SFXN2-201ENST00000369893 SLC4A1APQ9BWU0 796 aaKnown RBP14.86□□□□□ -0.03
SFXN2-201ENST00000369893 ITGAEP38570 1179 aa14.86□□□□□ -0.03
SFXN2-201ENST00000369893 ABCC9O60706 1549 aa14.82□□□□□ -0.04
SFXN2-201ENST00000369893 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.76□□□□□ -0.05
SFXN2-201ENST00000369893 HNRNPUL2Q1KMD3 747 aaKnown RBP14.76□□□□□ -0.05
SFXN2-201ENST00000369893 CHIC1Q5VXU3 224 aa14.72□□□□□ -0.05
SFXN2-201ENST00000369893 ZBTB47Q9UFB7 747 aaPredicted RBP14.68□□□□□ -0.06
SFXN2-201ENST00000369893 CDK11AQ9UQ88 783 aaPredicted RBP14.67□□□□□ -0.06
SFXN2-201ENST00000369893 PABPN1Q86U42 306 aaKnown RBP eCLIP14.66□□□□□ -0.06
SFXN2-201ENST00000369893 DIEXFQ68CQ4 756 aaKnown RBP14.65□□□□□ -0.06
SFXN2-201ENST00000369893 BCANQ96GW7 911 aa14.65□□□□□ -0.06
SFXN2-201ENST00000369893 EIF5BO60841 1220 aaKnown RBP14.55□□□□□ -0.08
SFXN2-201ENST00000369893 GTF3C3Q9Y5Q9 886 aa14.52□□□□□ -0.08
SFXN2-201ENST00000369893 GLIPR1L2Q4G1C9 344 aa14.5□□□□□ -0.09
SFXN2-201ENST00000369893 CANXP27824 592 aaKnown RBP14.5□□□□□ -0.09
SFXN2-201ENST00000369893 BCL11AQ9H165 835 aa14.49□□□□□ -0.09
SFXN2-201ENST00000369893 ANP32AP39687 249 aaKnown RBP14.48□□□□□ -0.09
SFXN2-201ENST00000369893 ANP32BQ92688 251 aaKnown RBP14.48□□□□□ -0.09
SFXN2-201ENST00000369893 ANP32CO43423 234 aa14.45□□□□□ -0.1
SFXN2-201ENST00000369893 SLC24A1O60721 1099 aa14.44□□□□□ -0.1
SFXN2-201ENST00000369893 TRIM52Q96A61 297 aa14.42□□□□□ -0.1
SFXN2-201ENST00000369893 NEUROD1Q13562 356 aa14.39□□□□□ -0.11
SFXN2-201ENST00000369893 FAM50AQ14320 339 aaKnown RBP14.39□□□□□ -0.11
SFXN2-201ENST00000369893 NPM2Q86SE8 214 aaKnown RBP14.38□□□□□ -0.11
SFXN2-201ENST00000369893 LOC105371045A0A1W2PR82 267 aa14.38□□□□□ -0.11
SFXN2-201ENST00000369893 NEFMP07197 916 aa14.33□□□□□ -0.12
SFXN2-201ENST00000369893 ZNF326Q5BKZ1 582 aaKnown RBP14.31□□□□□ -0.12
SFXN2-201ENST00000369893 HSP90AA1P07900 732 aaKnown RBP14.29□□□□□ -0.12
SFXN2-201ENST00000369893 UPF2Q9HAU5 1272 aaKnown RBP14.2□□□□□ -0.14
SFXN2-201ENST00000369893 ACIN1Q9UKV3 1341 aaKnown RBP14.18□□□□□ -0.14
SFXN2-201ENST00000369893 NBR1Q14596 966 aa14.11□□□□□ -0.15
SFXN2-201ENST00000369893 ARXQ96QS3 562 aa14.11□□□□□ -0.15
SFXN2-201ENST00000369893 CDK11BP21127 795 aaKnown RBP14.1□□□□□ -0.15
SFXN2-201ENST00000369893 FKBP8Q14318 412 aa14.1□□□□□ -0.15
SFXN2-201ENST00000369893 FBLN2P98095 1184 aa14.01□□□□□ -0.17
SFXN2-201ENST00000369893 TNNT2P45379 298 aaPredicted RBP14□□□□□ -0.17
SFXN2-201ENST00000369893 SCRIBQ14160 1630 aa13.96□□□□□ -0.17
SFXN2-201ENST00000369893 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.94□□□□□ -0.18
SFXN2-201ENST00000369893 TRIM44Q96DX7 344 aaPredicted RBP13.94□□□□□ -0.18
SFXN2-201ENST00000369893 CCDC136Q96JN2 1154 aa13.93□□□□□ -0.18
SFXN2-201ENST00000369893 HNRNPUQ00839 825 aaKnown RBP eCLIP13.93□□□□□ -0.18
SFXN2-201ENST00000369893 FAM9BQ8IZU0 186 aa13.9□□□□□ -0.18
SFXN2-201ENST00000369893 NCLP19338 710 aaKnown RBP13.9□□□□□ -0.18
SFXN2-201ENST00000369893 SALL2Q9Y467 1007 aaPredicted RBP13.87□□□□□ -0.19
SFXN2-201ENST00000369893 DDRGK1Q96HY6 314 aa13.85□□□□□ -0.19
SFXN2-201ENST00000369893 ANP32EQ9BTT0 268 aa13.84□□□□□ -0.19
SFXN2-201ENST00000369893 MYH16Q9H6N6 1097 aa13.83□□□□□ -0.19
SFXN2-201ENST00000369893 BECN1Q14457 450 aa13.83□□□□□ -0.2
SFXN2-201ENST00000369893 PTMAP06454 111 aaKnown RBP13.82□□□□□ -0.2
SFXN2-201ENST00000369893 GOLGA6L22H0YM25 854 aa13.81□□□□□ -0.2
SFXN2-201ENST00000369893 DNTTIP2Q5QJE6 756 aaKnown RBP13.8□□□□□ -0.2
SFXN2-201ENST00000369893 ZNF777Q9ULD5 760 aaPredicted RBP13.79□□□□□ -0.2
SFXN2-201ENST00000369893 WDR43Q15061 677 aaKnown RBP eCLIP13.79□□□□□ -0.2
SFXN2-201ENST00000369893 TONSLQ96HA7 1378 aa13.79□□□□□ -0.2
SFXN2-201ENST00000369893 STAG3Q9UJ98 1225 aa13.78□□□□□ -0.2
SFXN2-201ENST00000369893 TMC1Q8TDI8 760 aa13.77□□□□□ -0.2
SFXN2-201ENST00000369893 ESF1Q9H501 851 aaKnown RBP13.77□□□□□ -0.2
SFXN2-201ENST00000369893 CHGAP10645 457 aaKnown RBP13.77□□□□□ -0.21
SFXN2-201ENST00000369893 ZRSR1Q15695 479 aaKnown RBP13.77□□□□□ -0.21
SFXN2-201ENST00000369893 NAP1L5Q96NT1 182 aaPredicted RBP13.76□□□□□ -0.21
SFXN2-201ENST00000369893 ARID3CA6NKF2 412 aa13.76□□□□□ -0.21
SFXN2-201ENST00000369893 DDX10Q13206 875 aaKnown RBP13.75□□□□□ -0.21
SFXN2-201ENST00000369893 P3H3Q8IVL6 736 aa13.71□□□□□ -0.21
SFXN2-201ENST00000369893 IRX6P78412 446 aaPredicted RBP13.71□□□□□ -0.21
SFXN2-201ENST00000369893 ERICH6BQ5W0A0 696 aa13.71□□□□□ -0.22
SFXN2-201ENST00000369893 TPRNQ4KMQ1 711 aa13.67□□□□□ -0.22
SFXN2-201ENST00000369893 TULP1O00294 542 aaPredicted RBP13.67□□□□□ -0.22
SFXN2-201ENST00000369893 MRS2Q9HD23 443 aa13.66□□□□□ -0.22
SFXN2-201ENST00000369893 PLPPR3Q6T4P5 718 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms