Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 AC127383.1-201ENST00000444697 1800 ntBASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 AC087481.3-201ENST00000602886 1894 ntBASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 ANKRD19P-201ENST00000338192 862 ntBASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 AC009486.1-201ENST00000569860 813 ntBASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 AC000095.1-201ENST00000603208 874 ntBASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 AL139384.1-201ENST00000612143 3047 ntBASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPA3F8WFD2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 BNIP3P42-201ENST00000454982 569 ntBASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 CLUHP6-201ENST00000580789 941 ntBASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 BNIP3P29-201ENST00000598302 571 ntBASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 AC011447.5-201ENST00000616168 564 ntBASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 AC134312.5-201ENST00000568031 1313 ntBASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPA3F8WFD2 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms