Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM88BA6NKF7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 AP001094.4-201ENST00000579008 2176 ntBASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 HLA-DQB1-202ENST00000399079 1501 ntBASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 AC023141.7-201ENST00000430646 407 ntBASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 RPL35P9-201ENST00000446059 350 ntBASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 NEU3-207ENST00000534628 746 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 NAMA-206ENST00000605377 509 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 AL645608.8-201ENST00000606034 2086 ntBASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 AC106886.4-201ENST00000623557 2502 ntBASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM88BA6NKF7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 AC018695.7-201ENST00000624587 2492 ntBASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 AL157407.1-201ENST00000435784 904 ntBASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 RN7SL494P-201ENST00000461517 304 ntBASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 MARK2P16-201ENST00000605714 1723 ntBASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM88BA6NKF7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
TMEM88BA6NKF7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 FZD10-202ENST00000539839 3282 ntBASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TMEM88BA6NKF7 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms