Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 PPT1-213ENST00000641319 2388 ntBASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 AC142381.1-201ENST00000426099 345 ntBASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 RPS8P6-201ENST00000426177 609 ntBASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 GHSR-202ENST00000427970 912 ntBASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 SLC25A1P1-201ENST00000528351 927 ntBASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 AC097359.3-201ENST00000603982 1210 ntBASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 BX640515.1-201ENST00000617215 977 ntBASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.62□□□□□ -0.07
RIMS3Q9UJD0 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 AL136982.4-201ENST00000437689 1740 ntBASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 AC084364.1-201ENST00000551967 1556 ntBASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 FAM220BP-201ENST00000377689 816 ntBASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 FDX1P1-201ENST00000449115 551 ntBASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RIMS3Q9UJD0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms