Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 Z97205.2-201ENST00000564697 1639 ntBASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 AL079307.3-201ENST00000556114 283 ntBASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 AC093520.2-201ENST00000561830 333 ntBASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 MIR3687-2-201ENST00000577708 61 ntBASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 MIR3687-1-201ENST00000614492 61 ntBASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 AP001059.3-201ENST00000619053 235 ntBASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.3□□□□□ -0.12
POLR2J2Q9GZM3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 AJ011931.1-201ENST00000618749 2492 ntBASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 AC023141.5-201ENST00000458585 616 ntBASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.29□□□□□ -0.12
POLR2J2Q9GZM3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms