Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 AC016397.2-201ENST00000624848 1985 ntBASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
MBD3L1Q8WWY6 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 KRT8P22-201ENST00000562317 1415 ntBASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 AC007787.1-201ENST00000588095 1583 ntBASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 AL031133.1-201ENST00000406807 723 ntBASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 AC136604.1-201ENST00000418535 575 ntBASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 FAM86EP-206ENST00000510506 987 ntBASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.11□□□□□ -0.47
MBD3L1Q8WWY6 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 AL122018.1-201ENST00000446607 2310 ntBASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 AL607033.1-201ENST00000623900 1599 ntBASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
MBD3L1Q8WWY6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms