Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMC1Q8TDI8 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMC1Q8TDI8 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
TMC1Q8TDI8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TMC1Q8TDI8 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TMC1Q8TDI8 AC016694.1-201ENST00000434179 700 ntBASIC21.4■■□□□ 1.02
TMC1Q8TDI8 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC21.4■■□□□ 1.02
TMC1Q8TDI8 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC21.4■■□□□ 1.02
TMC1Q8TDI8 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC21.4■■□□□ 1.02
TMC1Q8TDI8 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TMC1Q8TDI8 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMC1Q8TDI8 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMC1Q8TDI8 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
TMC1Q8TDI8 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMC1Q8TDI8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TMC1Q8TDI8 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
TMC1Q8TDI8 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TMC1Q8TDI8 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TMC1Q8TDI8 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC21.39■■□□□ 1.02
TMC1Q8TDI8 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TMC1Q8TDI8 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
TMC1Q8TDI8 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC21.39■■□□□ 1.02
TMC1Q8TDI8 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
TMC1Q8TDI8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TMC1Q8TDI8 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TMC1Q8TDI8 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
TMC1Q8TDI8 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TMC1Q8TDI8 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC21.39■■□□□ 1.01
TMC1Q8TDI8 CSF2RBP1-201ENST00000447905 391 ntBASIC21.39■■□□□ 1.01
TMC1Q8TDI8 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC21.39■■□□□ 1.01
TMC1Q8TDI8 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC21.39■■□□□ 1.01
TMC1Q8TDI8 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC21.39■■□□□ 1.01
TMC1Q8TDI8 GPR39-203ENST00000622084 900 ntTSL 5 BASIC21.39■■□□□ 1.01
TMC1Q8TDI8 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC21.39■■□□□ 1.01
TMC1Q8TDI8 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
TMC1Q8TDI8 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC21.39■■□□□ 1.01
TMC1Q8TDI8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TMC1Q8TDI8 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TMC1Q8TDI8 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC21.39■■□□□ 1.01
TMC1Q8TDI8 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC21.39■■□□□ 1.01
TMC1Q8TDI8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TMC1Q8TDI8 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TMC1Q8TDI8 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC21.39■■□□□ 1.01
TMC1Q8TDI8 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
TMC1Q8TDI8 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
TMC1Q8TDI8 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC21.39■■□□□ 1.01
TMC1Q8TDI8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 GNRHR2-203ENST00000581100 1187 ntBASIC21.38■■□□□ 1.01
TMC1Q8TDI8 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMC1Q8TDI8 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TMC1Q8TDI8 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMC1Q8TDI8 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMC1Q8TDI8 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMC1Q8TDI8 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC21.37■■□□□ 1.01
TMC1Q8TDI8 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC21.37■■□□□ 1.01
TMC1Q8TDI8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TMC1Q8TDI8 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TMC1Q8TDI8 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMC1Q8TDI8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TMC1Q8TDI8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TMC1Q8TDI8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC21.37■■□□□ 1.01
TMC1Q8TDI8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMC1Q8TDI8 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMC1Q8TDI8 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
TMC1Q8TDI8 ZBTB12BP-201ENST00000314232 1122 ntBASIC21.37■■□□□ 1.01
TMC1Q8TDI8 GZMB-202ENST00000382540 816 ntTSL 5 BASIC21.37■■□□□ 1.01
TMC1Q8TDI8 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
TMC1Q8TDI8 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC21.37■■□□□ 1.01
TMC1Q8TDI8 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC21.37■■□□□ 1.01
TMC1Q8TDI8 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms