Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SVIPQ8NHG7 ZIC4-217ENST00000525172 4152 ntTSL 2 BASIC9.34□□□□□ -0.91
SVIPQ8NHG7 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
SVIPQ8NHG7 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC9.34□□□□□ -0.92
SVIPQ8NHG7 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.92
SVIPQ8NHG7 AGO2-205ENST00000519980 3141 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
SVIPQ8NHG7 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 AC023154.1-203ENST00000508813 2465 ntTSL 2 BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 LINC01235-201ENST00000604724 2328 ntTSL 2 BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 OR13A1-201ENST00000374401 2574 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 RNF4-201ENST00000314289 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 ZNF423-201ENST00000262383 4578 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 AC090983.1-201ENST00000623426 3897 ntBASIC9.33□□□□□ -0.92
SVIPQ8NHG7 GAA-201ENST00000302262 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 SFPQP1-201ENST00000446621 1786 ntBASIC9.33□□□□□ -0.92
SVIPQ8NHG7 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 AC018645.3-201ENST00000628855 2646 ntBASIC9.33□□□□□ -0.92
SVIPQ8NHG7 Z98257.2-202ENST00000641138 1548 ntBASIC9.33□□□□□ -0.92
SVIPQ8NHG7 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 LTA4H-201ENST00000228740 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 AC121493.1-201ENST00000602316 450 ntBASIC9.33□□□□□ -0.92
SVIPQ8NHG7 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 AC079416.2-201ENST00000625035 1193 ntBASIC9.33□□□□□ -0.92
SVIPQ8NHG7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 AC092919.2-201ENST00000623631 1645 ntBASIC9.33□□□□□ -0.92
SVIPQ8NHG7 SEC23B-202ENST00000336714 3411 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 FBN2-201ENST00000262464 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 AC126323.1-203ENST00000562306 2579 ntBASIC9.33□□□□□ -0.92
SVIPQ8NHG7 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 FEM1AP3-201ENST00000403722 1741 ntBASIC9.33□□□□□ -0.92
SVIPQ8NHG7 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 AP003063.2-201ENST00000525984 2067 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 PCDH12-201ENST00000231484 6562 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 LINC00689-201ENST00000413238 4684 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 AC022364.1-202ENST00000617468 2409 ntBASIC9.33□□□□□ -0.92
SVIPQ8NHG7 POLA2-201ENST00000265465 3744 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 EIF4BP7-201ENST00000432307 1813 ntBASIC9.33□□□□□ -0.92
SVIPQ8NHG7 LINC02112-201ENST00000511616 1847 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 AC002350.2-201ENST00000623894 1828 ntBASIC9.33□□□□□ -0.92
SVIPQ8NHG7 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 FYCO1-201ENST00000296137 8504 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 HDC-202ENST00000543581 2180 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 AKR1B10-201ENST00000359579 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
SVIPQ8NHG7 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 DRAXIN-201ENST00000294485 7346 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 SLC6A12-202ENST00000397296 3294 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 POTEG-202ENST00000547848 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 KCNE1-209ENST00000621601 3148 ntAPPRIS P1 TSL 4 BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 WIPF1-204ENST00000392547 4587 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 PARD6G-AS1-202ENST00000586421 3333 ntTSL 2 BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 DLG1-215ENST00000448528 2977 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 RPL22-201ENST00000234875 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 ZNF266-202ENST00000588221 3503 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 SCLT1-201ENST00000281142 3055 ntAPPRIS P3 TSL 2 BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 CDV3-202ENST00000420115 3621 ntTSL 2 BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 SCFD2-202ENST00000401642 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SVIPQ8NHG7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC9.32□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms