RNA–Protein interactions for RNA: ENST00000525172.6

ZIC4-217, Transcript of Zic family member 4, humanhuman

TSL 2 BASIC

Gene ZIC4, Length 4,152 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-217ENST00000525172 NISCHQ9Y2I1 1504 aa20.2■□□□□ 0.82
ZIC4-217ENST00000525172 SUPT5HO00267 1087 aaKnown RBP19.57■□□□□ 0.72
ZIC4-217ENST00000525172 PCGF6Q9BYE7 350 aa19.41■□□□□ 0.7
ZIC4-217ENST00000525172 SHROOM4Q9ULL8 1493 aa19.24■□□□□ 0.67
ZIC4-217ENST00000525172 PELP1Q8IZL8 1130 aaKnown RBP19.19■□□□□ 0.66
ZIC4-217ENST00000525172 HRCP23327 699 aa19.1■□□□□ 0.65
ZIC4-217ENST00000525172 DCAF8L2P0C7V8 631 aa19.07■□□□□ 0.64
ZIC4-217ENST00000525172 PPARGC1BQ86YN6 1023 aaKnown RBP19.06■□□□□ 0.64
ZIC4-217ENST00000525172 EHMT2Q96KQ7 1210 aa18.84■□□□□ 0.61
ZIC4-217ENST00000525172 MYT1Q01538 1121 aa18.63■□□□□ 0.57
ZIC4-217ENST00000525172 CENPBP07199 599 aaPredicted RBP18.47■□□□□ 0.55
ZIC4-217ENST00000525172 ZEB1P37275 1124 aaPredicted RBP18.39■□□□□ 0.53
ZIC4-217ENST00000525172 FAM9AQ8IZU1 332 aaPredicted RBP18.39■□□□□ 0.53
ZIC4-217ENST00000525172 YTHDC1Q96MU7 727 aaKnown RBP18.37■□□□□ 0.53
ZIC4-217ENST00000525172 TTBK1Q5TCY1 1321 aaPredicted RBP18.34■□□□□ 0.53
ZIC4-217ENST00000525172 LOC105371045A0A1W2PR82 267 aa18.28■□□□□ 0.52
ZIC4-217ENST00000525172 TRIM26Q12899 539 aaPredicted RBP18.26■□□□□ 0.51
ZIC4-217ENST00000525172 CCER1Q8TC90 406 aaPredicted RBP18.23■□□□□ 0.51
ZIC4-217ENST00000525172 CHIC1Q5VXU3 224 aa18.2■□□□□ 0.5
ZIC4-217ENST00000525172 SCAF1Q9H7N4 1312 aaKnown RBP18.13■□□□□ 0.49
ZIC4-217ENST00000525172 GTF3C3Q9Y5Q9 886 aa18.12■□□□□ 0.49
ZIC4-217ENST00000525172 ACIN1Q9UKV3 1341 aaKnown RBP17.91■□□□□ 0.46
ZIC4-217ENST00000525172 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.87■□□□□ 0.45
ZIC4-217ENST00000525172 DIEXFQ68CQ4 756 aaKnown RBP17.86■□□□□ 0.45
ZIC4-217ENST00000525172 TRIM41Q8WV44 630 aa17.83■□□□□ 0.45
ZIC4-217ENST00000525172 NEUROD1Q13562 356 aa17.81■□□□□ 0.44
ZIC4-217ENST00000525172 ERICH6Q7L0X2 663 aa17.77■□□□□ 0.43
ZIC4-217ENST00000525172 MYO15BQ96JP2 1530 aa17.58■□□□□ 0.41
ZIC4-217ENST00000525172 RANGAP1P46060 587 aaPredicted RBP17.49■□□□□ 0.39
ZIC4-217ENST00000525172 APLP2Q06481 763 aa17.49■□□□□ 0.39
ZIC4-217ENST00000525172 BCANQ96GW7 911 aa17.47■□□□□ 0.39
ZIC4-217ENST00000525172 NEFLP07196 543 aa17.46■□□□□ 0.39
ZIC4-217ENST00000525172 HNRNPUL2Q1KMD3 747 aaKnown RBP17.37■□□□□ 0.37
ZIC4-217ENST00000525172 DCAF1Q9Y4B6 1507 aa17.34■□□□□ 0.37
ZIC4-217ENST00000525172 UBTFP17480 764 aaKnown RBP17.32■□□□□ 0.36
ZIC4-217ENST00000525172 ZNF316A6NFI3 1004 aaPredicted RBP17.28■□□□□ 0.36
ZIC4-217ENST00000525172 BCL11AQ9H165 835 aa17.19■□□□□ 0.34
ZIC4-217ENST00000525172 MIER1Q8N108 512 aa17.12■□□□□ 0.33
ZIC4-217ENST00000525172 ANP32EQ9BTT0 268 aa17.07■□□□□ 0.32
ZIC4-217ENST00000525172 ITGAEP38570 1179 aa17.03■□□□□ 0.32
ZIC4-217ENST00000525172 FKBP8Q14318 412 aa16.96■□□□□ 0.31
ZIC4-217ENST00000525172 CCDC180Q9P1Z9 1646 aa16.95■□□□□ 0.3
ZIC4-217ENST00000525172 RTL5Q5HYW3 569 aaPredicted RBP16.89■□□□□ 0.3
ZIC4-217ENST00000525172 ZCCHC6Q5VYS8 1495 aaKnown RBP16.88■□□□□ 0.29
ZIC4-217ENST00000525172 ABCC9O60706 1549 aa16.88■□□□□ 0.29
ZIC4-217ENST00000525172 CSRNP3Q8WYN3 585 aa16.86■□□□□ 0.29
ZIC4-217ENST00000525172 CNGB1Q14028 1251 aaPredicted RBP16.85■□□□□ 0.29
ZIC4-217ENST00000525172 ATP1B4Q9UN42 357 aaPredicted RBP16.81■□□□□ 0.28
ZIC4-217ENST00000525172 CDK11AQ9UQ88 783 aaPredicted RBP16.81■□□□□ 0.28
ZIC4-217ENST00000525172 SUPT16HQ9Y5B9 1047 aaKnown RBP16.81■□□□□ 0.28
ZIC4-217ENST00000525172 NBR1Q14596 966 aa16.75■□□□□ 0.27
ZIC4-217ENST00000525172 EIF5BO60841 1220 aaKnown RBP16.72■□□□□ 0.27
ZIC4-217ENST00000525172 CLSPNQ9HAW4 1339 aa16.71■□□□□ 0.27
ZIC4-217ENST00000525172 TRIM52Q96A61 297 aa16.7■□□□□ 0.26
ZIC4-217ENST00000525172 TSHZ2Q9NRE2 1034 aa16.68■□□□□ 0.26
ZIC4-217ENST00000525172 IRX6P78412 446 aaPredicted RBP16.66■□□□□ 0.26
ZIC4-217ENST00000525172 POLR3GLQ9BT43 218 aa16.6■□□□□ 0.25
ZIC4-217ENST00000525172 DDX10Q13206 875 aaKnown RBP16.59■□□□□ 0.25
ZIC4-217ENST00000525172 ANP32CO43423 234 aa16.59■□□□□ 0.25
ZIC4-217ENST00000525172 DAXXQ9UER7 740 aaPredicted RBP16.59■□□□□ 0.25
ZIC4-217ENST00000525172 RTN4Q9NQC3 1192 aaKnown RBP16.56■□□□□ 0.24
ZIC4-217ENST00000525172 RBM19Q9Y4C8 960 aaKnown RBP16.53■□□□□ 0.24
ZIC4-217ENST00000525172 NPM2Q86SE8 214 aaKnown RBP16.52■□□□□ 0.23
ZIC4-217ENST00000525172 HIRIP3Q9BW71 556 aaPredicted RBP16.48■□□□□ 0.23
ZIC4-217ENST00000525172 HNRNPUQ00839 825 aaKnown RBP eCLIP16.46■□□□□ 0.23
ZIC4-217ENST00000525172 ANP32AP39687 249 aaKnown RBP16.45■□□□□ 0.22
ZIC4-217ENST00000525172 DEKP35659 375 aaKnown RBP16.42■□□□□ 0.22
ZIC4-217ENST00000525172 PABPN1Q86U42 306 aaKnown RBP eCLIP16.41■□□□□ 0.22
ZIC4-217ENST00000525172 MYT1LQ9UL68 1186 aa16.39■□□□□ 0.21
ZIC4-217ENST00000525172 SCRIBQ14160 1630 aa16.39■□□□□ 0.21
ZIC4-217ENST00000525172 FAM50AQ14320 339 aaKnown RBP16.39■□□□□ 0.21
ZIC4-217ENST00000525172 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.34■□□□□ 0.21
ZIC4-217ENST00000525172 PRKCSHP14314 528 aaPredicted RBP16.33■□□□□ 0.21
ZIC4-217ENST00000525172 CCDC136Q96JN2 1154 aa16.33■□□□□ 0.2
ZIC4-217ENST00000525172 ZBTB47Q9UFB7 747 aaPredicted RBP16.31■□□□□ 0.2
ZIC4-217ENST00000525172 KCNH8Q96L42 1107 aa16.28■□□□□ 0.2
ZIC4-217ENST00000525172 FAM9BQ8IZU0 186 aa16.27■□□□□ 0.2
ZIC4-217ENST00000525172 SENP3-EIF4A1A0A087X0R7 540 aa16.24■□□□□ 0.19
ZIC4-217ENST00000525172 CEP162Q5TB80 1403 aa16.19■□□□□ 0.18
ZIC4-217ENST00000525172 B4GALNT3Q6L9W6 998 aa16.18■□□□□ 0.18
ZIC4-217ENST00000525172 NOP58Q9Y2X3 529 aaKnown RBP16.18■□□□□ 0.18
ZIC4-217ENST00000525172 ARXQ96QS3 562 aa16.18■□□□□ 0.18
ZIC4-217ENST00000525172 LAS1LQ9Y4W2 734 aaKnown RBP16.17■□□□□ 0.18
ZIC4-217ENST00000525172 ANO8Q9HCE9 1232 aaPredicted RBP16.16■□□□□ 0.18
ZIC4-217ENST00000525172 SALL2Q9Y467 1007 aaPredicted RBP16.09■□□□□ 0.17
ZIC4-217ENST00000525172 NACADO15069 1562 aa16.07■□□□□ 0.16
ZIC4-217ENST00000525172 ZNF326Q5BKZ1 582 aaKnown RBP16.07■□□□□ 0.16
ZIC4-217ENST00000525172 NEFMP07197 916 aa16.06■□□□□ 0.16
ZIC4-217ENST00000525172 GLIPR1L2Q4G1C9 344 aa16.04■□□□□ 0.16
ZIC4-217ENST00000525172 MRS2Q9HD23 443 aa16.04■□□□□ 0.16
ZIC4-217ENST00000525172 RSF1Q96T23 1441 aaPredicted RBP16.03■□□□□ 0.16
ZIC4-217ENST00000525172 SIN3AQ96ST3 1273 aa16.02■□□□□ 0.16
ZIC4-217ENST00000525172 RB1CC1Q8TDY2 1594 aa16.02■□□□□ 0.16
ZIC4-217ENST00000525172 PPP4R2Q9NY27 417 aa16.02■□□□□ 0.15
ZIC4-217ENST00000525172 TONSLQ96HA7 1378 aa16.01■□□□□ 0.15
ZIC4-217ENST00000525172 P3H3Q8IVL6 736 aa15.97■□□□□ 0.15
ZIC4-217ENST00000525172 CLIP1P30622 1438 aa15.96■□□□□ 0.15
ZIC4-217ENST00000525172 CECR2Q9BXF3 1484 aa15.91■□□□□ 0.14
ZIC4-217ENST00000525172 MSH5O43196 834 aa15.9■□□□□ 0.14
ZIC4-217ENST00000525172 TNIKQ9UKE5 1360 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms