Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIPK4Q8NE63 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
HIPK4Q8NE63 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.06■□□□□ 0
HIPK4Q8NE63 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
HIPK4Q8NE63 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
HIPK4Q8NE63 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HIPK4Q8NE63 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIPK4Q8NE63 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HIPK4Q8NE63 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.06■□□□□ 0
HIPK4Q8NE63 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.06■□□□□ 0
HIPK4Q8NE63 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIPK4Q8NE63 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIPK4Q8NE63 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HIPK4Q8NE63 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.05■□□□□ 0
HIPK4Q8NE63 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.05■□□□□ 0
HIPK4Q8NE63 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
HIPK4Q8NE63 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.05■□□□□ 0
HIPK4Q8NE63 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.05■□□□□ 0
HIPK4Q8NE63 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC15.05■□□□□ 0
HIPK4Q8NE63 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
HIPK4Q8NE63 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HIPK4Q8NE63 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.05■□□□□ 0
HIPK4Q8NE63 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HIPK4Q8NE63 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HIPK4Q8NE63 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
HIPK4Q8NE63 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
HIPK4Q8NE63 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HIPK4Q8NE63 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIPK4Q8NE63 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.05■□□□□ -0
HIPK4Q8NE63 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
HIPK4Q8NE63 AC138969.2-201ENST00000532739 9932 ntBASIC15.05■□□□□ -0
HIPK4Q8NE63 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
HIPK4Q8NE63 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIPK4Q8NE63 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIPK4Q8NE63 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.05■□□□□ -0
HIPK4Q8NE63 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
HIPK4Q8NE63 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.05■□□□□ -0
HIPK4Q8NE63 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.05■□□□□ -0
HIPK4Q8NE63 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
HIPK4Q8NE63 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.05■□□□□ -0
HIPK4Q8NE63 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.05■□□□□ -0
HIPK4Q8NE63 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.05■□□□□ -0
HIPK4Q8NE63 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.05■□□□□ -0
HIPK4Q8NE63 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.05■□□□□ -0
HIPK4Q8NE63 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.05■□□□□ -0
HIPK4Q8NE63 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIPK4Q8NE63 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.05■□□□□ -0
HIPK4Q8NE63 Z83851.2-201ENST00000609564 659 ntBASIC15.05■□□□□ -0
HIPK4Q8NE63 AL161645.1-201ENST00000622716 1255 ntBASIC15.05■□□□□ -0
HIPK4Q8NE63 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.05■□□□□ -0
HIPK4Q8NE63 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC15.05■□□□□ -0
HIPK4Q8NE63 BCAR1-209ENST00000546196 1340 ntBASIC15.05■□□□□ -0
HIPK4Q8NE63 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
HIPK4Q8NE63 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.05■□□□□ -0
HIPK4Q8NE63 AC025580.3-201ENST00000617932 1424 ntBASIC15.05■□□□□ -0
HIPK4Q8NE63 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.05■□□□□ -0
HIPK4Q8NE63 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
HIPK4Q8NE63 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
HIPK4Q8NE63 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.05■□□□□ -0
HIPK4Q8NE63 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
HIPK4Q8NE63 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.05■□□□□ -0
HIPK4Q8NE63 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIPK4Q8NE63 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.05■□□□□ -0
HIPK4Q8NE63 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIPK4Q8NE63 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.05■□□□□ -0
HIPK4Q8NE63 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
HIPK4Q8NE63 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIPK4Q8NE63 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
HIPK4Q8NE63 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
HIPK4Q8NE63 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.05■□□□□ -0
HIPK4Q8NE63 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIPK4Q8NE63 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
HIPK4Q8NE63 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIPK4Q8NE63 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIPK4Q8NE63 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.05■□□□□ -0
HIPK4Q8NE63 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HIPK4Q8NE63 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
HIPK4Q8NE63 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
HIPK4Q8NE63 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
HIPK4Q8NE63 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
HIPK4Q8NE63 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
HIPK4Q8NE63 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
HIPK4Q8NE63 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIPK4Q8NE63 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
HIPK4Q8NE63 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.04■□□□□ -0
HIPK4Q8NE63 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
HIPK4Q8NE63 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.04■□□□□ -0
HIPK4Q8NE63 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIPK4Q8NE63 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
HIPK4Q8NE63 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIPK4Q8NE63 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.04■□□□□ -0
HIPK4Q8NE63 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIPK4Q8NE63 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIPK4Q8NE63 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
HIPK4Q8NE63 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIPK4Q8NE63 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HIPK4Q8NE63 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.04■□□□□ -0
HIPK4Q8NE63 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
HIPK4Q8NE63 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIPK4Q8NE63 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms