Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 DUX4L45-201ENST00000566406 1057 ntBASIC15.67■□□□□ 0.1
CHPFQ8IZ52 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 MIR6787-201ENST00000616675 61 ntBASIC15.67■□□□□ 0.1
CHPFQ8IZ52 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 HYMAI-201ENST00000635591 3347 ntBASIC15.67■□□□□ 0.1
CHPFQ8IZ52 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHPFQ8IZ52 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 AC078819.1-201ENST00000547454 765 ntBASIC15.66■□□□□ 0.1
CHPFQ8IZ52 AC012085.1-201ENST00000548270 765 ntBASIC15.66■□□□□ 0.1
CHPFQ8IZ52 AC132938.4-201ENST00000623835 848 ntBASIC15.66■□□□□ 0.1
CHPFQ8IZ52 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHPFQ8IZ52 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 AC020907.1-201ENST00000616460 1350 ntBASIC15.65■□□□□ 0.1
CHPFQ8IZ52 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms