Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC20.45■□□□□ 0.86
KRT28Q7Z3Y7 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KRT28Q7Z3Y7 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
KRT28Q7Z3Y7 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC20.45■□□□□ 0.86
KRT28Q7Z3Y7 MIR3677-201ENST00000578964 60 ntBASIC20.45■□□□□ 0.86
KRT28Q7Z3Y7 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
KRT28Q7Z3Y7 MIR4649-201ENST00000582839 64 ntBASIC20.45■□□□□ 0.86
KRT28Q7Z3Y7 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC20.45■□□□□ 0.86
KRT28Q7Z3Y7 MIR6756-201ENST00000616240 63 ntBASIC20.45■□□□□ 0.86
KRT28Q7Z3Y7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KRT28Q7Z3Y7 PCDHA12-202ENST00000613593 2588 ntBASIC20.45■□□□□ 0.86
KRT28Q7Z3Y7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT28Q7Z3Y7 AP003680.1-201ENST00000598970 3660 ntBASIC20.45■□□□□ 0.86
KRT28Q7Z3Y7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.45■□□□□ 0.86
KRT28Q7Z3Y7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT28Q7Z3Y7 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT28Q7Z3Y7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT28Q7Z3Y7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KRT28Q7Z3Y7 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 AC092127.1-201ENST00000567093 3455 ntBASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 AL031713.1-201ENST00000564813 661 ntBASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 AC009884.2-201ENST00000603110 324 ntBASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 AC025271.4-201ENST00000621477 1726 ntBASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT28Q7Z3Y7 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 AC097065.1-201ENST00000425737 517 ntBASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 AC008723.1-201ENST00000506922 207 ntBASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 AL157813.1-201ENST00000612996 587 ntBASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 AL138725.1-201ENST00000407347 1314 ntBASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT28Q7Z3Y7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 SLC9A7P1-202ENST00000556476 2239 ntBASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 AL512430.1-201ENST00000392575 860 ntBASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 NAGK-204ENST00000443872 878 ntTSL 3 BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC20.42■□□□□ 0.86
KRT28Q7Z3Y7 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms