Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 RNU1-114P-201ENST00000365297 166 ntBASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 NPM1P43-201ENST00000558669 786 ntBASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 PPY2P-201ENST00000582808 702 ntBASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 COX6A1P2-201ENST00000620597 330 ntBASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
OTOP1Q7RTM1 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 AC007950.2-201ENST00000615045 2347 ntBASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.65■□□□□ 0.42
OTOP1Q7RTM1 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
OTOP1Q7RTM1 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.64■□□□□ 0.42
OTOP1Q7RTM1 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
OTOP1Q7RTM1 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.42
OTOP1Q7RTM1 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 DPM3-202ENST00000368399 517 ntBASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 AL133267.1-201ENST00000398220 340 ntBASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 AL627389.1-201ENST00000413508 1182 ntBASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 FGFR3P1-201ENST00000449999 601 ntBASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 AC135983.4-201ENST00000564116 1262 ntBASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 AC022748.3-201ENST00000621828 275 ntBASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 AL139384.1-201ENST00000612143 3047 ntBASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.64■□□□□ 0.41
OTOP1Q7RTM1 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms