Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CLK1P49759 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLK1P49759 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.59□□□□□ -0.07
CLK1P49759 AC005840.4-201ENST00000541242 2494 ntBASIC14.59□□□□□ -0.07
CLK1P49759 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLK1P49759 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLK1P49759 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLK1P49759 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.59□□□□□ -0.07
CLK1P49759 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CLK1P49759 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.59□□□□□ -0.07
CLK1P49759 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CLK1P49759 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLK1P49759 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CLK1P49759 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLK1P49759 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CLK1P49759 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.59□□□□□ -0.07
CLK1P49759 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.59□□□□□ -0.07
CLK1P49759 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.58□□□□□ -0.07
CLK1P49759 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.58□□□□□ -0.07
CLK1P49759 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CLK1P49759 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.07
CLK1P49759 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CLK1P49759 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.58□□□□□ -0.07
CLK1P49759 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
CLK1P49759 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CLK1P49759 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
CLK1P49759 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
CLK1P49759 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.58□□□□□ -0.07
CLK1P49759 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CLK1P49759 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLK1P49759 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLK1P49759 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLK1P49759 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.58□□□□□ -0.08
CLK1P49759 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLK1P49759 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLK1P49759 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.58□□□□□ -0.08
CLK1P49759 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CLK1P49759 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.58□□□□□ -0.08
CLK1P49759 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLK1P49759 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLK1P49759 SPDYE7P-202ENST00000420373 878 ntBASIC14.58□□□□□ -0.08
CLK1P49759 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.58□□□□□ -0.08
CLK1P49759 FAM58DP-201ENST00000428076 619 ntBASIC14.58□□□□□ -0.08
CLK1P49759 AL353705.2-201ENST00000428243 662 ntBASIC14.58□□□□□ -0.08
CLK1P49759 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.58□□□□□ -0.08
CLK1P49759 RBPMS2P1-201ENST00000437762 623 ntBASIC14.58□□□□□ -0.08
CLK1P49759 DNAJB3-202ENST00000449667 1266 ntBASIC14.58□□□□□ -0.08
CLK1P49759 AL139010.1-201ENST00000454878 894 ntBASIC14.58□□□□□ -0.08
CLK1P49759 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.58□□□□□ -0.08
CLK1P49759 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.58□□□□□ -0.08
CLK1P49759 AC243562.2-201ENST00000561247 970 ntBASIC14.58□□□□□ -0.08
CLK1P49759 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLK1P49759 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.58□□□□□ -0.08
CLK1P49759 AC018529.1-201ENST00000613063 361 ntBASIC14.58□□□□□ -0.08
CLK1P49759 AL691403.2-201ENST00000618460 490 ntBASIC14.58□□□□□ -0.08
CLK1P49759 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLK1P49759 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.58□□□□□ -0.08
CLK1P49759 CICP14-201ENST00000629111 2732 ntBASIC14.58□□□□□ -0.08
CLK1P49759 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.58□□□□□ -0.08
CLK1P49759 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLK1P49759 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLK1P49759 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CLK1P49759 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLK1P49759 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.58□□□□□ -0.08
CLK1P49759 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLK1P49759 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLK1P49759 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLK1P49759 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLK1P49759 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLK1P49759 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLK1P49759 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.57□□□□□ -0.08
CLK1P49759 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.57□□□□□ -0.08
CLK1P49759 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CLK1P49759 AL359183.1-201ENST00000623796 2132 ntBASIC14.57□□□□□ -0.08
CLK1P49759 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLK1P49759 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLK1P49759 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.57□□□□□ -0.08
CLK1P49759 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CLK1P49759 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CLK1P49759 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.57□□□□□ -0.08
CLK1P49759 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLK1P49759 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLK1P49759 AC008677.1-201ENST00000519230 1561 ntBASIC14.57□□□□□ -0.08
CLK1P49759 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLK1P49759 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLK1P49759 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.57□□□□□ -0.08
CLK1P49759 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLK1P49759 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLK1P49759 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.57□□□□□ -0.08
CLK1P49759 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CLK1P49759 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.57□□□□□ -0.08
CLK1P49759 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.57□□□□□ -0.08
CLK1P49759 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.57□□□□□ -0.08
CLK1P49759 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLK1P49759 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CLK1P49759 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLK1P49759 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CLK1P49759 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLK1P49759 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLK1P49759 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms