Protein–RNA interactions for Protein: P42338

PIK3CB, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3CBP42338 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PIK3CBP42338 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIK3CBP42338 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIK3CBP42338 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PIK3CBP42338 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.83□□□□□ -0.04
PIK3CBP42338 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PIK3CBP42338 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIK3CBP42338 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PIK3CBP42338 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
PIK3CBP42338 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIK3CBP42338 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIK3CBP42338 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIK3CBP42338 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.83□□□□□ -0.04
PIK3CBP42338 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIK3CBP42338 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.82□□□□□ -0.04
PIK3CBP42338 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PIK3CBP42338 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PIK3CBP42338 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PIK3CBP42338 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PIK3CBP42338 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PIK3CBP42338 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.82□□□□□ -0.04
PIK3CBP42338 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.82□□□□□ -0.04
PIK3CBP42338 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
PIK3CBP42338 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.82□□□□□ -0.04
PIK3CBP42338 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
PIK3CBP42338 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PIK3CBP42338 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PIK3CBP42338 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PIK3CBP42338 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PIK3CBP42338 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.82□□□□□ -0.04
PIK3CBP42338 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.82□□□□□ -0.04
PIK3CBP42338 MEP1AP4-201ENST00000423244 1087 ntBASIC14.82□□□□□ -0.04
PIK3CBP42338 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PIK3CBP42338 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PIK3CBP42338 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PIK3CBP42338 RARRES2P5-201ENST00000564013 466 ntBASIC14.82□□□□□ -0.04
PIK3CBP42338 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PIK3CBP42338 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PIK3CBP42338 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PIK3CBP42338 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.82□□□□□ -0.04
PIK3CBP42338 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PIK3CBP42338 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PIK3CBP42338 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PIK3CBP42338 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
PIK3CBP42338 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
PIK3CBP42338 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PIK3CBP42338 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PIK3CBP42338 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PIK3CBP42338 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PIK3CBP42338 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PIK3CBP42338 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.82□□□□□ -0.04
PIK3CBP42338 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.82□□□□□ -0.04
PIK3CBP42338 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.82□□□□□ -0.04
PIK3CBP42338 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
PIK3CBP42338 AC012508.2-201ENST00000567613 1472 ntBASIC14.82□□□□□ -0.04
PIK3CBP42338 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PIK3CBP42338 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PIK3CBP42338 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PIK3CBP42338 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3CBP42338 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3CBP42338 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3CBP42338 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3CBP42338 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
PIK3CBP42338 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3CBP42338 OR2I1P-209ENST00000641730 5365 ntBASIC14.81□□□□□ -0.04
PIK3CBP42338 AC023908.3-201ENST00000564211 3047 ntBASIC14.81□□□□□ -0.04
PIK3CBP42338 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.81□□□□□ -0.04
PIK3CBP42338 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.81□□□□□ -0.04
PIK3CBP42338 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3CBP42338 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3CBP42338 AL589987.1-201ENST00000453380 819 ntBASIC14.81□□□□□ -0.04
PIK3CBP42338 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.81□□□□□ -0.04
PIK3CBP42338 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.81□□□□□ -0.04
PIK3CBP42338 AC104794.3-201ENST00000566840 1248 ntBASIC14.81□□□□□ -0.04
PIK3CBP42338 AC036164.1-201ENST00000570544 333 ntBASIC14.81□□□□□ -0.04
PIK3CBP42338 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3CBP42338 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PIK3CBP42338 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.81□□□□□ -0.04
PIK3CBP42338 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.81□□□□□ -0.04
PIK3CBP42338 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.81□□□□□ -0.04
PIK3CBP42338 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.81□□□□□ -0.04
PIK3CBP42338 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.81□□□□□ -0.04
PIK3CBP42338 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3CBP42338 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3CBP42338 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3CBP42338 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3CBP42338 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3CBP42338 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3CBP42338 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
PIK3CBP42338 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3CBP42338 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3CBP42338 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3CBP42338 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.81□□□□□ -0.04
PIK3CBP42338 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3CBP42338 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
PIK3CBP42338 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3CBP42338 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PIK3CBP42338 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIK3CBP42338 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PIK3CBP42338 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms