Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA3P32297 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRNA3P32297 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.28■□□□□ 0.2
CHRNA3P32297 AC009118.2-201ENST00000613275 655 ntBASIC16.28■□□□□ 0.2
CHRNA3P32297 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CHRNA3P32297 AL033527.5-202ENST00000641632 1098 ntBASIC16.28■□□□□ 0.2
CHRNA3P32297 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA3P32297 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRNA3P32297 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CHRNA3P32297 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.28■□□□□ 0.2
CHRNA3P32297 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.28■□□□□ 0.2
CHRNA3P32297 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA3P32297 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CHRNA3P32297 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CHRNA3P32297 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CHRNA3P32297 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA3P32297 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA3P32297 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CHRNA3P32297 OR2I1P-210ENST00000642037 4691 ntBASIC16.28■□□□□ 0.2
CHRNA3P32297 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA3P32297 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA3P32297 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA3P32297 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA3P32297 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CHRNA3P32297 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA3P32297 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.27■□□□□ 0.2
CHRNA3P32297 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA3P32297 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA3P32297 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.27■□□□□ 0.2
CHRNA3P32297 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA3P32297 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CHRNA3P32297 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
CHRNA3P32297 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA3P32297 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA3P32297 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.27■□□□□ 0.2
CHRNA3P32297 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA3P32297 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CHRNA3P32297 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA3P32297 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA3P32297 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA3P32297 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA3P32297 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.27■□□□□ 0.2
CHRNA3P32297 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.27■□□□□ 0.2
CHRNA3P32297 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA3P32297 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.27■□□□□ 0.2
CHRNA3P32297 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.27■□□□□ 0.2
CHRNA3P32297 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.27■□□□□ 0.2
CHRNA3P32297 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.27■□□□□ 0.2
CHRNA3P32297 AC010336.2-201ENST00000564226 506 ntBASIC16.27■□□□□ 0.2
CHRNA3P32297 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.27■□□□□ 0.2
CHRNA3P32297 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.27■□□□□ 0.2
CHRNA3P32297 AC008738.7-201ENST00000609744 511 ntBASIC16.27■□□□□ 0.2
CHRNA3P32297 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CHRNA3P32297 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA3P32297 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.27■□□□□ 0.19
CHRNA3P32297 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHRNA3P32297 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHRNA3P32297 GRK6P1-201ENST00000400595 1711 ntBASIC16.27■□□□□ 0.19
CHRNA3P32297 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHRNA3P32297 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CHRNA3P32297 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHRNA3P32297 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHRNA3P32297 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.27■□□□□ 0.19
CHRNA3P32297 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHRNA3P32297 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CHRNA3P32297 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHRNA3P32297 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.27■□□□□ 0.19
CHRNA3P32297 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CHRNA3P32297 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.26■□□□□ 0.19
CHRNA3P32297 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.26■□□□□ 0.19
CHRNA3P32297 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.26■□□□□ 0.19
CHRNA3P32297 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.26■□□□□ 0.19
CHRNA3P32297 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.26■□□□□ 0.19
CHRNA3P32297 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.26■□□□□ 0.19
CHRNA3P32297 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.26■□□□□ 0.19
CHRNA3P32297 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.26■□□□□ 0.19
CHRNA3P32297 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CHRNA3P32297 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA3P32297 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms