Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
TNFSF4P23510 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.23□□□□□ -0.29
TNFSF4P23510 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TNFSF4P23510 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TNFSF4P23510 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TNFSF4P23510 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.23□□□□□ -0.29
TNFSF4P23510 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.23□□□□□ -0.29
TNFSF4P23510 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TNFSF4P23510 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.23□□□□□ -0.29
TNFSF4P23510 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TNFSF4P23510 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.22□□□□□ -0.29
TNFSF4P23510 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TNFSF4P23510 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TNFSF4P23510 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TNFSF4P23510 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.22□□□□□ -0.29
TNFSF4P23510 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TNFSF4P23510 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TNFSF4P23510 AC099063.4-201ENST00000641099 1602 ntBASIC13.22□□□□□ -0.29
TNFSF4P23510 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TNFSF4P23510 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TNFSF4P23510 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TNFSF4P23510 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TNFSF4P23510 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.22□□□□□ -0.29
TNFSF4P23510 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TNFSF4P23510 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TNFSF4P23510 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.22□□□□□ -0.29
TNFSF4P23510 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.22□□□□□ -0.29
TNFSF4P23510 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.22□□□□□ -0.29
TNFSF4P23510 COX20P2-201ENST00000452636 358 ntBASIC13.22□□□□□ -0.29
TNFSF4P23510 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.22□□□□□ -0.29
TNFSF4P23510 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.22□□□□□ -0.29
TNFSF4P23510 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.22□□□□□ -0.29
TNFSF4P23510 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.22□□□□□ -0.29
TNFSF4P23510 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.22□□□□□ -0.29
TNFSF4P23510 AC004790.1-201ENST00000612686 536 ntBASIC13.22□□□□□ -0.29
TNFSF4P23510 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.22□□□□□ -0.29
TNFSF4P23510 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TNFSF4P23510 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TNFSF4P23510 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TNFSF4P23510 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.22□□□□□ -0.29
TNFSF4P23510 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TNFSF4P23510 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.22□□□□□ -0.29
TNFSF4P23510 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TNFSF4P23510 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.22□□□□□ -0.29
TNFSF4P23510 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TNFSF4P23510 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TNFSF4P23510 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
TNFSF4P23510 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TNFSF4P23510 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TNFSF4P23510 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TNFSF4P23510 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TNFSF4P23510 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.22□□□□□ -0.29
TNFSF4P23510 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
TNFSF4P23510 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TNFSF4P23510 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.21□□□□□ -0.29
TNFSF4P23510 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.21□□□□□ -0.29
TNFSF4P23510 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.21□□□□□ -0.29
TNFSF4P23510 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TNFSF4P23510 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
TNFSF4P23510 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.21□□□□□ -0.29
TNFSF4P23510 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNFSF4P23510 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TNFSF4P23510 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNFSF4P23510 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNFSF4P23510 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.21□□□□□ -0.29
TNFSF4P23510 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNFSF4P23510 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNFSF4P23510 AC084364.1-201ENST00000551967 1556 ntBASIC13.21□□□□□ -0.29
TNFSF4P23510 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.21□□□□□ -0.29
TNFSF4P23510 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNFSF4P23510 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
TNFSF4P23510 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNFSF4P23510 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNFSF4P23510 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TNFSF4P23510 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.21□□□□□ -0.29
TNFSF4P23510 SOCS2P1-201ENST00000417727 557 ntBASIC13.21□□□□□ -0.29
TNFSF4P23510 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
TNFSF4P23510 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNFSF4P23510 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.21□□□□□ -0.29
TNFSF4P23510 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNFSF4P23510 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TNFSF4P23510 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.21□□□□□ -0.29
TNFSF4P23510 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.21□□□□□ -0.29
TNFSF4P23510 AC092552.1-201ENST00000547243 906 ntBASIC13.21□□□□□ -0.29
TNFSF4P23510 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.29
TNFSF4P23510 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.21□□□□□ -0.29
TNFSF4P23510 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.21□□□□□ -0.29
TNFSF4P23510 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.21□□□□□ -0.29
TNFSF4P23510 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.21□□□□□ -0.29
TNFSF4P23510 CHCHD2P3-201ENST00000603038 451 ntBASIC13.21□□□□□ -0.29
TNFSF4P23510 AL391069.4-201ENST00000609583 481 ntBASIC13.21□□□□□ -0.29
TNFSF4P23510 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms