Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
CD48P09326 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.95■□□□□ 0.14
CD48P09326 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CD48P09326 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CD48P09326 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.95■□□□□ 0.14
CD48P09326 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.95■□□□□ 0.14
CD48P09326 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.95■□□□□ 0.14
CD48P09326 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.95■□□□□ 0.14
CD48P09326 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 FAM86LP-201ENST00000478302 853 ntBASIC15.95■□□□□ 0.14
CD48P09326 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.95■□□□□ 0.14
CD48P09326 TPRX2P-201ENST00000535362 881 ntBASIC15.95■□□□□ 0.14
CD48P09326 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.95■□□□□ 0.14
CD48P09326 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.95■□□□□ 0.14
CD48P09326 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.95■□□□□ 0.14
CD48P09326 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.95■□□□□ 0.14
CD48P09326 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.95■□□□□ 0.14
CD48P09326 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.95■□□□□ 0.14
CD48P09326 AL662799.1-202ENST00000614205 422 ntBASIC15.95■□□□□ 0.14
CD48P09326 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CD48P09326 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CD48P09326 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.95■□□□□ 0.14
CD48P09326 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD48P09326 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.94■□□□□ 0.14
CD48P09326 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD48P09326 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CD48P09326 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD48P09326 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CD48P09326 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CD48P09326 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD48P09326 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.94■□□□□ 0.14
CD48P09326 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.94■□□□□ 0.14
CD48P09326 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD48P09326 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CD48P09326 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CD48P09326 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD48P09326 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD48P09326 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CD48P09326 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CD48P09326 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD48P09326 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.94■□□□□ 0.14
CD48P09326 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CD48P09326 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CD48P09326 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.94■□□□□ 0.14
CD48P09326 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.94■□□□□ 0.14
CD48P09326 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.94■□□□□ 0.14
CD48P09326 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.94■□□□□ 0.14
CD48P09326 SAMD11P1-201ENST00000571429 661 ntBASIC15.94■□□□□ 0.14
CD48P09326 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.94■□□□□ 0.14
CD48P09326 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.94■□□□□ 0.14
CD48P09326 MIR8072-201ENST00000614241 80 ntBASIC15.94■□□□□ 0.14
CD48P09326 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD48P09326 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.94■□□□□ 0.14
CD48P09326 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CD48P09326 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD48P09326 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD48P09326 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.94■□□□□ 0.14
CD48P09326 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD48P09326 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD48P09326 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD48P09326 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD48P09326 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CD48P09326 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CD48P09326 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CD48P09326 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CD48P09326 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CD48P09326 DRD5P1-201ENST00000456605 1438 ntBASIC15.94■□□□□ 0.14
CD48P09326 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.94■□□□□ 0.14
CD48P09326 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CD48P09326 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CD48P09326 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CD48P09326 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CD48P09326 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CD48P09326 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CD48P09326 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CD48P09326 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CD48P09326 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CD48P09326 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CD48P09326 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CD48P09326 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CD48P09326 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.93■□□□□ 0.14
CD48P09326 RN7SL399P-201ENST00000471648 279 ntBASIC15.93■□□□□ 0.14
CD48P09326 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CD48P09326 INGX-202ENST00000489074 768 ntBASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms