Protein–RNA interactions for Protein: P08922

ROS1, Proto-oncogene tyrosine-protein kinase ROS, humanhuman

Predictions only

Length 2,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ROS1P08922 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
ROS1P08922 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ROS1P08922 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ROS1P08922 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.28□□□□□ -0.28
ROS1P08922 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ROS1P08922 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ROS1P08922 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ROS1P08922 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ROS1P08922 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.28□□□□□ -0.28
ROS1P08922 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ROS1P08922 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ROS1P08922 AC006001.1-201ENST00000325130 474 ntBASIC13.28□□□□□ -0.28
ROS1P08922 RNU1-114P-201ENST00000365297 166 ntBASIC13.28□□□□□ -0.28
ROS1P08922 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.28□□□□□ -0.28
ROS1P08922 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.28□□□□□ -0.28
ROS1P08922 CNN2P8-201ENST00000421872 913 ntBASIC13.28□□□□□ -0.28
ROS1P08922 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ROS1P08922 AC006033.1-201ENST00000440505 426 ntBASIC13.28□□□□□ -0.28
ROS1P08922 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ROS1P08922 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.28□□□□□ -0.28
ROS1P08922 AC078819.1-201ENST00000547454 765 ntBASIC13.28□□□□□ -0.28
ROS1P08922 AC012085.1-201ENST00000548270 765 ntBASIC13.28□□□□□ -0.28
ROS1P08922 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.28□□□□□ -0.28
ROS1P08922 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ROS1P08922 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.28□□□□□ -0.28
ROS1P08922 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.28□□□□□ -0.28
ROS1P08922 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ROS1P08922 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ROS1P08922 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ROS1P08922 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ROS1P08922 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.28□□□□□ -0.28
ROS1P08922 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ROS1P08922 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ROS1P08922 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ROS1P08922 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ROS1P08922 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ROS1P08922 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.28□□□□□ -0.28
ROS1P08922 AL138799.1-201ENST00000448213 1675 ntBASIC13.28□□□□□ -0.28
ROS1P08922 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.28□□□□□ -0.28
ROS1P08922 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.28□□□□□ -0.28
ROS1P08922 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ROS1P08922 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ROS1P08922 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ROS1P08922 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.28□□□□□ -0.28
ROS1P08922 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.28□□□□□ -0.28
ROS1P08922 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ROS1P08922 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.28□□□□□ -0.28
ROS1P08922 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
ROS1P08922 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.28□□□□□ -0.28
ROS1P08922 KRT8P13-201ENST00000463294 1010 ntBASIC13.28□□□□□ -0.28
ROS1P08922 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ROS1P08922 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.28□□□□□ -0.28
ROS1P08922 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.28□□□□□ -0.28
ROS1P08922 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.28□□□□□ -0.28
ROS1P08922 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ROS1P08922 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ROS1P08922 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.27□□□□□ -0.28
ROS1P08922 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ROS1P08922 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ROS1P08922 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.27□□□□□ -0.28
ROS1P08922 AC138969.2-201ENST00000532739 9932 ntBASIC13.27□□□□□ -0.28
ROS1P08922 AL603832.2-201ENST00000566195 2125 ntBASIC13.27□□□□□ -0.28
ROS1P08922 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.27□□□□□ -0.28
ROS1P08922 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
ROS1P08922 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
ROS1P08922 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
ROS1P08922 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
ROS1P08922 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ROS1P08922 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ROS1P08922 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ROS1P08922 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.27□□□□□ -0.28
ROS1P08922 CALR4P-201ENST00000431943 946 ntBASIC13.27□□□□□ -0.28
ROS1P08922 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.27□□□□□ -0.28
ROS1P08922 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.27□□□□□ -0.28
ROS1P08922 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
ROS1P08922 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.27□□□□□ -0.28
ROS1P08922 AC025279.2-201ENST00000569730 653 ntBASIC13.27□□□□□ -0.28
ROS1P08922 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.27□□□□□ -0.28
ROS1P08922 AC005695.3-201ENST00000614522 232 ntBASIC13.27□□□□□ -0.28
ROS1P08922 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
ROS1P08922 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ROS1P08922 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
ROS1P08922 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.27□□□□□ -0.29
ROS1P08922 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ROS1P08922 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ROS1P08922 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ROS1P08922 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.27□□□□□ -0.29
ROS1P08922 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ROS1P08922 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
ROS1P08922 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ROS1P08922 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
ROS1P08922 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
ROS1P08922 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
ROS1P08922 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
ROS1P08922 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ROS1P08922 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ROS1P08922 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ROS1P08922 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.27□□□□□ -0.29
ROS1P08922 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
ROS1P08922 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms